#!/bin/sh #------------------------------------------------------------------------------ # ========= | # \\ / F ield | OpenFOAM: The Open Source CFD Toolbox # \\ / O peration | # \\ / A nd | Copyright (C) 2011-2014 OpenFOAM Foundation # \\/ M anipulation | #------------------------------------------------------------------------------- # License # This file is part of OpenFOAM. # # OpenFOAM is free software: you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # OpenFOAM is distributed in the hope that it will be useful, but WITHOUT # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or # FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License # for more details. # # You should have received a copy of the GNU General Public License # along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>. # # Script # foamEndJob # # Description # Ends running job on current machine. Called with root,case,pid. # - checks if pid exists # - modifies controlDict # - waits until # - pid disappeared # - controlDict modified # to restore controlDict # #------------------------------------------------------------------------------- Script=${0##*/} usage() { exec 1>&2 while [ "$#" -ge 1 ]; do echo "$1"; shift; done cat<<USAGE Usage: $Script [OPTION] <pid> Usage: $Script [OPTION] -c options: -clear clear any outstanding $Script for the case -case <dir> specify alternative case directory, default is the cwd -now stop at next time step -help print the usage Tries to end running OpenFOAM application at next write (or optionally at the next time step). It needs runTimeModifiable switched on in the controlDict. It changes stopAt in the controlDict and waits for the job to finish. Restores original controlDict if - job has finished - controlDict gets modified (by user) - $Script gets killed. The -clear option clears any outstanding $Script for the case. USAGE exit 1 } unset clearOpt stopOpt # parse options while [ "$#" -gt 0 ] do case "$1" in -h | -help) usage ;; -case) [ "$#" -ge 2 ] || usage "'$1' option requires an argument" cd "$2" 2>/dev/null || usage "directory does not exist: '$2'" shift 2 ;; -c | -clear) clearOpt=true shift ;; -n | -now) stopOpt=now shift ;; -*) usage "unknown option: '$*'" ;; *) break ;; esac done # parent directory for normal or parallel case "$PWD" in processor*) caseDir=".." ;; *) caseDir="." ;; esac # check that case directory is writeable [ -w $caseDir ] || { echo "$Script : $caseDir is not writeable" exit 1 } # check that controlDict is writeable controlDict=$caseDir/system/controlDict [ -w $controlDict ] || { echo "$Script : $controlDict is not writeable" exit 1 } # need a pid unless with the -clear option if [ "$clearOpt" = true ] then [ $# -eq 0 ] || usage else [ $# -eq 1 ] || usage PID=$1 fi #------------------------------------------------------------------------------- # # Functions # #------------------------------------------------------------------------------- # getNumberedLine dictionary entry # Prints dictionary entry line + lineno getNumberedLine() { grep -n "^[ \t]*$2[ \t]" $1 | grep -v '^//' | head -1 } # getLine dictionary entry # Prints dictionary entry line (without lineno) getLine() { getNumberedLine $1 "$2" | sed -e 's/^[^:]*://' } # getRawEntry dictionary entry # Prints value of dictionary entry getRawEntry() { getLine $1 "$2" | sed -e "s/^[ \t]*$2[ \t][ \t]*//" } # getEntry dictionary entry # Like getRawEntry but strips " and ending ';' getEntry() { getRawEntry $1 "$2" | sed -e 's/^"//' -e 's/;$//' -e 's/"$//' } # getKey entryLine # Prints first item on line getKey() { echo "$1" | sed -e 's/[ \t]*\(.*\)[ \t].*/\1/' } # setRawEntry dictionary entry newValue # Replaces value of entry setRawEntry() { oldNumLine=`getNumberedLine $1 "$2"` lineNo=`echo "$oldNumLine" | sed -e 's/:.*//'` oldLine=`echo "$oldNumLine" | sed -e 's/^[^:]*://'` oldKey=`getKey "$oldLine"` oldVal=`getRawEntry $1 "$2"` if [ ! "$oldKey" -o ! "$oldVal" -o ! "$oldLine" ] then echo "setRawStringEntry: entry $2 not found in $1" echo "oldKey=$oldKey" echo "lineNo=$lineNo" echo "oldLine=$oldLine" exit 1 fi #echo "oldKey=$oldKey" #echo "lineNo=$lineNo" #echo "oldLine=$oldLine" #echo "oldVal=$oldVal" mv $1 ${1}_tmp sed -e "${lineNo}s/ ${oldVal}/ $3;/" ${1}_tmp > $1 rm -f ${1}_tmp } # like getEntry but returns true if boolean is logical true getBoolEntry() { val=`getEntry $1 $2` case "$val" in y | yes | true | on | 1) return 0 ;; n | no | false | off | 0) return 123 ;; *) echo "$Script : getBoolEntry : Illegal boolean value $val in dictionary $1" exit 1 ;; esac } # processExists pid # Returns true if pid exists. processExists() { ps -u $LOGNAME -o pid | fgrep $1 >/dev/null } # Restore controlDict and clean up restoreDict() { trap QUIT TERM INT echo "$Script : Restoring controlDict from controlDict_bak" if [ -r ${controlDict}_bak ] then cp ${controlDict}_bak $controlDict fi rm -f $pidFile echo "$Script : Exiting" exit 0 } #------------------------------------------------------------------------------- # # Main # #------------------------------------------------------------------------------- #-- Force standards behaving ps # Get info on all $USER processes case `uname -s` in HP-UX*) UNIX95=a export UNIX95 ;; IRIX*) _XPG=1 export _XPG ;; esac # Pid actually running if [ "$clearOpt" != true ] then processExists $PID if [ $? -ne 0 ] then echo "$Script : process $PID not running" exit 1 fi fi #- runTimeModifiable getBoolEntry $controlDict runTimeModifiable || { echo "$Script : runTimeModifiable not true in dictionary $controlDict" exit 1 } # #- Check if another foamEndJob running # if [ "$clear" = true ] then pidFiles=`ls $caseDir/.foamEndJob* 2>/dev/null` for pidFile in $pidFiles do pid=`cat $pidFile` if [ "$pid" ] then echo "$Script : found $Script (pid $pid) for OpenFOAM process" echo " case: $PWD/$caseDir" echo "$Script : Killing $Script (pid $pid)" kill $pid rm -f $pidFile fi done exit 0 fi pidFile=$caseDir/.foamEndJob$PID if [ -f $pidFile ] then pid=`cat $pidFile` if [ "$pid" ] then processExists $pid if [ $? -eq 0 ] then echo "$Script : found running $Script (pid $pid) for OpenFOAM process" echo " case: $PWD/$caseDir" echo " pid : $PID" echo " lock: $pidFile" echo "Remove the lock if this is not the case" exit 1 fi fi fi # Mark with my pid echo $$ > $pidFile # #- Get controlDict entries # #- startTime startTime=`getEntry $controlDict startTime` [ "$startTime" ] || { echo "$Script : startTime not set in dictionary $controlDict" exit 1 } #- Write interval writeInterval=`getEntry $controlDict writeInterval` [ "$writeInterval" ] || { echo "$Script : writeInterval not set in dictionary $controlDict" exit 1 } #- stopAt stopAt=`getEntry $controlDict stopAt` [ "$stopAt" ] || { echo "$Script : stopAt not set in dictionary $controlDict" exit 1 } #- endTime endTime=`getEntry $controlDict endTime` [ "$endTime" ] || { echo "$Script : endTime not set in dictionary $controlDict" exit 1 } echo "$Script : Read from controlDict:" echo " controlDict : $controlDict" echo " writeInterval : $writeInterval" #echo " startTime : $startTime" echo " stopAt : $stopAt" #echo " endTime : $endTime" echo "$Script : Making backup of controlDict to controlDict_bak" cp $controlDict ${controlDict}_bak #- Set up handler to restore controlDict trap restoreDict QUIT TERM INT if [ "$stopOpt" = now ] then setRawEntry $controlDict stopAt nextWrite setRawEntry $controlDict writeControl timeStep setRawEntry $controlDict writeInterval 1 echo "$Script : Changed in controlDict:" echo " `getLine $controlDict stopAt`" echo " `getLine $controlDict writeControl`" echo " `getLine $controlDict writeInterval`" else setRawEntry $controlDict stopAt nextWrite echo "$Script : Changed in controlDict:" echo " `getLine $controlDict stopAt`" fi #- Just to make sure time has changed touch ${controlDict} sleep 5 #- Give bak a later date touch ${controlDict}_bak #- Loop a while to give NFS time to update if [ ${controlDict} -nt ${controlDict}_bak ] then echo "$Script : controlDict newer than controlDict_bak" echo "$Script : Waiting for file dates to get updated" iter=0 while [ ${controlDict} -nt ${controlDict}_bak ] do if [ $iter -ge 120 ] then #- 120*5 sec = 10 mins passed. Give up echo "$Script : File date not yet ok after 10 mins ... giving up" break fi #- Give _bak a later time touch ${controlDict}_bak #- Give NFS a chance to update time on controlDict. sleep 5 iter=`expr $iter + 1` done fi # #- Start waiting until: # - pid finished. Restore controlDict. # - controlDict modified. No restore. # - controlDict_bak removed. No restore. echo "$Script : Waiting for OpenFOAM job $PID to finish ..." while true do sleep 5 [ -r ${controlDict}_bak ] || { echo "$Script : ${controlDict}_bak disappeared. Exiting without restore" exit 1 } if [ ${controlDict} -nt ${controlDict}_bak ] then echo "$Script : ${controlDict} modified externally. Exiting without restore" exit 0 fi processExists $PID if [ $? -ne 0 ] then #- Job finished break fi # echo "OpenFOAM job $PID still running ..." done #- Dictionary restore restoreDict #------------------------------------------------------------------------------