diff --git a/applications/solvers/Lagrangian/reactingParcelFoam/Make/files b/applications/solvers/Lagrangian/reactingParcelFoam/Make/files
index ea13ecb0c59ab2c13459051e71c737ee139cc06a..3710ca4e2df104e37cd2c720455d658fd102d2d0 100644
--- a/applications/solvers/Lagrangian/reactingParcelFoam/Make/files
+++ b/applications/solvers/Lagrangian/reactingParcelFoam/Make/files
@@ -1,3 +1,3 @@
reactingParcelFoam.C
-EXE = $(FOAM_USER_APPBIN)/reactingParcelFoam
+EXE = $(FOAM_APPBIN)/reactingParcelFoam
diff --git a/applications/solvers/combustion/coalChemistryFoam/Make/files b/applications/solvers/combustion/coalChemistryFoam/Make/files
index 6a1392f01cc62ffcfa923a26726558e36d3f78c9..552d73450173870f57cee6a4b126b16fd63d08be 100644
--- a/applications/solvers/combustion/coalChemistryFoam/Make/files
+++ b/applications/solvers/combustion/coalChemistryFoam/Make/files
@@ -1,3 +1,3 @@
coalChemistryFoam.C
-EXE = $(FOAM_USER_APPBIN)/coalChemistryFoam
+EXE = $(FOAM_APPBIN)/coalChemistryFoam
diff --git a/applications/solvers/multiphase/twoLiquidMixingFoam/alphaEqn.H b/applications/solvers/multiphase/twoLiquidMixingFoam/alphaEqn.H
index c12602536870ab39e1a63a81062b143d5d360c00..d152baba0bb44a1f2cd042596f94030157e0f713 100644
--- a/applications/solvers/multiphase/twoLiquidMixingFoam/alphaEqn.H
+++ b/applications/solvers/multiphase/twoLiquidMixingFoam/alphaEqn.H
@@ -3,7 +3,11 @@
(
fvm::ddt(alpha1)
+ fvm::div(phi, alpha1)
- - fvm::laplacian(Dab, alpha1)
+ - fvm::laplacian
+ (
+ Dab + alphatab*turbulence->nut(), alpha1,
+ "laplacian(Dab,alpha1)"
+ )
);
alpha1Eqn.solve();
diff --git a/applications/solvers/multiphase/twoLiquidMixingFoam/createFields.H b/applications/solvers/multiphase/twoLiquidMixingFoam/createFields.H
index a38135dc19a968cd10cf38beec6b3a35a4e4165b..3b5e064372bae2278984d8585dd4a3fc95e385fb 100644
--- a/applications/solvers/multiphase/twoLiquidMixingFoam/createFields.H
+++ b/applications/solvers/multiphase/twoLiquidMixingFoam/createFields.H
@@ -50,6 +50,9 @@
dimensionedScalar Dab(twoPhaseProperties.lookup("Dab"));
+ // Read the reciprocal of the turbulent Schmidt number
+ dimensionedScalar alphatab(twoPhaseProperties.lookup("alphatab"));
+
// Need to store rho for ddt(rho, U)
volScalarField rho("rho", alpha1*rho1 + (scalar(1) - alpha1)*rho2);
rho.oldTime();
diff --git a/applications/utilities/parallelProcessing/decomposePar/decomposeParDict b/applications/utilities/parallelProcessing/decomposePar/decomposeParDict
index 0c566d50812ffcdbd856d09f12ebac9244177468..aad15ee459b6e01cdf6fabba08eb2fa5b8c2a4dd 100644
--- a/applications/utilities/parallelProcessing/decomposePar/decomposeParDict
+++ b/applications/utilities/parallelProcessing/decomposePar/decomposeParDict
@@ -55,7 +55,17 @@ metisCoeffs
}
scotchCoeffs
-{}
+{
+ //processorWeights
+ //(
+ // 1
+ // 1
+ // 1
+ // 1
+ //);
+ //writeGraph true;
+ //strategy "b";
+}
manualCoeffs
{
diff --git a/applications/utilities/postProcessing/patch/patchIntegrate/patchIntegrate.C b/applications/utilities/postProcessing/patch/patchIntegrate/patchIntegrate.C
index dc92aade57b699d0a6b4816c1825684b304b2575..54acae002582bfa1dcb5e09c5c20255be2c7bac4 100644
--- a/applications/utilities/postProcessing/patch/patchIntegrate/patchIntegrate.C
+++ b/applications/utilities/postProcessing/patch/patchIntegrate/patchIntegrate.C
@@ -78,7 +78,7 @@ int main(int argc, char *argv[])
// Give patch area
if (isType<cyclicPolyPatch>(mesh.boundaryMesh()[patchi]))
{
- Info<< " Cyclic patch area: " << nl;
+ Info<< " Cyclic patch vector area: " << nl;
label nFaces = mesh.boundaryMesh()[patchi].size();
vector sum1 = vector::zero;
vector sum2 = vector::zero;
@@ -92,12 +92,18 @@ int main(int argc, char *argv[])
Info<< " - half 1 = " << sum1 << ", " << mag(sum1) << nl
<< " - half 2 = " << sum2 << ", " << mag(sum2) << nl
<< " - total = " << (sum1 + sum2) << ", "
- << mag(sum1 + sum2) << endl;;
+ << mag(sum1 + sum2) << endl;
+ Info<< " Cyclic patch area magnitude = "
+ << gSum(mesh.magSf().boundaryField()[patchi])/2.0 << endl;
}
else
{
- Info<< " Patch area = "
+ Info<< " Area vector of patch "
+ << patchName << '[' << patchi << ']' << " = "
<< gSum(mesh.Sf().boundaryField()[patchi]) << endl;
+ Info<< " Area magnitude of patch "
+ << patchName << '[' << patchi << ']' << " = "
+ << gSum(mesh.magSf().boundaryField()[patchi]) << endl;
}
// Read field and calc integral
@@ -107,15 +113,26 @@ int main(int argc, char *argv[])
<< fieldName << endl;
volScalarField field(fieldHeader, mesh);
- vector sumField = gSum
- (
- mesh.Sf().boundaryField()[patchi]
- *field.boundaryField()[patchi]
- );
- Info<< " Integral of " << fieldName << " over patch "
+ Info<< " Integral of " << fieldName
+ << " over vector area of patch "
<< patchName << '[' << patchi << ']' << " = "
- << sumField << nl;
+ << gSum
+ (
+ mesh.Sf().boundaryField()[patchi]
+ *field.boundaryField()[patchi]
+ )
+ << nl;
+
+ Info<< " Integral of " << fieldName
+ << " over area magnitude of patch "
+ << patchName << '[' << patchi << ']' << " = "
+ << gSum
+ (
+ mesh.magSf().boundaryField()[patchi]
+ *field.boundaryField()[patchi]
+ )
+ << nl;
}
else if
(
diff --git a/applications/utilities/postProcessing/wall/yPlusLES/Make/options b/applications/utilities/postProcessing/wall/yPlusLES/Make/options
index 79fbbac91eff3fd29abdd775aa543a905a0c1162..f6131ce41c17a8d8d5b852fe0e1f07e1d62308f6 100644
--- a/applications/utilities/postProcessing/wall/yPlusLES/Make/options
+++ b/applications/utilities/postProcessing/wall/yPlusLES/Make/options
@@ -1,4 +1,5 @@
EXE_INC = \
+ -I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/turbulenceModels \
-I$(LIB_SRC)/turbulenceModels/incompressible/LES/LESModel \
-I$(LIB_SRC)/turbulenceModels/LES/LESdeltas/lnInclude \
diff --git a/applications/utilities/postProcessing/wall/yPlusLES/yPlusLES.C b/applications/utilities/postProcessing/wall/yPlusLES/yPlusLES.C
index 82ee27fa0ab6580cfcece3f9854718ded7abe196..67dc0df3f0e8c333fb2996255b047c34f8455f3c 100644
--- a/applications/utilities/postProcessing/wall/yPlusLES/yPlusLES.C
+++ b/applications/utilities/postProcessing/wall/yPlusLES/yPlusLES.C
@@ -34,6 +34,7 @@ Description
#include "incompressible/singlePhaseTransportModel/singlePhaseTransportModel.H"
#include "LESModel.H"
#include "nearWallDist.H"
+#include "wallDist.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@@ -49,7 +50,18 @@ int main(int argc, char *argv[])
{
runTime.setTime(timeDirs[timeI], timeI);
Info<< "Time = " << runTime.timeName() << endl;
- mesh.readUpdate();
+ fvMesh::readUpdateState state = mesh.readUpdate();
+
+ // Wall distance
+ if (timeI == 0 || state != fvMesh::UNCHANGED)
+ {
+ Info<< "Calculating wall distance\n" << endl;
+ wallDist y(mesh, true);
+ Info<< "Writing wall distance to field "
+ << y.name() << nl << endl;
+ y.write();
+ }
+
volScalarField yPlus
(
@@ -116,6 +128,9 @@ int main(int argc, char *argv[])
}
}
+ Info<< "Writing yPlus to field "
+ << yPlus.name() << nl << endl;
+
yPlus.write();
}
diff --git a/applications/utilities/postProcessing/wall/yPlusRAS/Make/options b/applications/utilities/postProcessing/wall/yPlusRAS/Make/options
index 89632547e0815e442b8f0082777fabb715fbc981..9ec5fca52baaa1f55b00483950ab4cf2ad1f9909 100644
--- a/applications/utilities/postProcessing/wall/yPlusRAS/Make/options
+++ b/applications/utilities/postProcessing/wall/yPlusRAS/Make/options
@@ -1,4 +1,5 @@
EXE_INC = \
+ -I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/transportModels \
-I$(LIB_SRC)/turbulenceModels \
-I$(LIB_SRC)/turbulenceModels/incompressible/RAS/RASModel \
diff --git a/applications/utilities/postProcessing/wall/yPlusRAS/yPlusRAS.C b/applications/utilities/postProcessing/wall/yPlusRAS/yPlusRAS.C
index 7d1e4796f2b5f75ae740b31169a522bbc9dfbd9d..a93712263e6aafbc375270c815609afc5aae904f 100644
--- a/applications/utilities/postProcessing/wall/yPlusRAS/yPlusRAS.C
+++ b/applications/utilities/postProcessing/wall/yPlusRAS/yPlusRAS.C
@@ -34,6 +34,7 @@ Description
#include "incompressible/singlePhaseTransportModel/singlePhaseTransportModel.H"
#include "RASModel.H"
#include "wallFvPatch.H"
+#include "wallDist.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@@ -49,7 +50,17 @@ int main(int argc, char *argv[])
{
runTime.setTime(timeDirs[timeI], timeI);
Info<< "Time = " << runTime.timeName() << endl;
- mesh.readUpdate();
+ fvMesh::readUpdateState state = mesh.readUpdate();
+
+ // Wall distance
+ if (timeI == 0 || state != fvMesh::UNCHANGED)
+ {
+ Info<< "Calculating wall distance\n" << endl;
+ wallDist y(mesh, true);
+ Info<< "Writing wall distance to field "
+ << y.name() << nl << endl;
+ y.write();
+ }
volScalarField yPlus
(
@@ -106,6 +117,9 @@ int main(int argc, char *argv[])
}
}
+ Info<< "Writing yPlus to field "
+ << yPlus.name() << nl << endl;
+
yPlus.write();
}
diff --git a/src/OpenFOAM/meshes/polyMesh/globalMeshData/globalIndex.H b/src/OpenFOAM/meshes/polyMesh/globalMeshData/globalIndex.H
index 5f7ed0a2b269f283af2a0c5f9f1d624c2bb83d97..c74d82b182d556b080368ee1e920579041f1871b 100644
--- a/src/OpenFOAM/meshes/polyMesh/globalMeshData/globalIndex.H
+++ b/src/OpenFOAM/meshes/polyMesh/globalMeshData/globalIndex.H
@@ -84,6 +84,9 @@ public:
//- Start of procI+1 data
inline const labelList& offsets() const;
+ //- my local size
+ inline label localSize() const;
+
//- Global sum of localSizes
inline label size() const;
diff --git a/src/OpenFOAM/meshes/polyMesh/globalMeshData/globalIndexI.H b/src/OpenFOAM/meshes/polyMesh/globalMeshData/globalIndexI.H
index b01ed6e8ba8240ffd7903f721c4102663baeb5dc..65f5d2d9d06f4c50e49a0232184f0dd1aedeca92 100644
--- a/src/OpenFOAM/meshes/polyMesh/globalMeshData/globalIndexI.H
+++ b/src/OpenFOAM/meshes/polyMesh/globalMeshData/globalIndexI.H
@@ -34,6 +34,17 @@ inline const Foam::labelList& Foam::globalIndex::offsets() const
}
+inline Foam::label Foam::globalIndex::localSize() const
+{
+ return
+ (
+ Pstream::myProcNo() == 0
+ ? offsets_[Pstream::myProcNo()]
+ : offsets_[Pstream::myProcNo()] - offsets_[Pstream::myProcNo()-1]
+ );
+}
+
+
inline Foam::label Foam::globalIndex::size() const
{
return offsets_[Pstream::nProcs()-1];
diff --git a/src/decompositionMethods/decompositionMethods/scotchDecomp/scotchDecomp.C b/src/decompositionMethods/decompositionMethods/scotchDecomp/scotchDecomp.C
index a33e49b82889148fb6d3db92ff7d51dd3d2bc80e..994a82419285a24da2695f3e3850ee4580d1f8ac 100644
--- a/src/decompositionMethods/decompositionMethods/scotchDecomp/scotchDecomp.C
+++ b/src/decompositionMethods/decompositionMethods/scotchDecomp/scotchDecomp.C
@@ -75,6 +75,24 @@ extern "C"
}
+// Hack: scotch generates floating point errors so need to switch of error
+// trapping!
+#if defined(linux) || defined(linuxAMD64) || defined(linuxIA64)
+# define LINUX
+#endif
+
+#if defined(LINUX) && defined(__GNUC__)
+# define LINUX_GNUC
+#endif
+
+#ifdef LINUX_GNUC
+# ifndef __USE_GNU
+# define __USE_GNU
+# endif
+# include <fenv.h>
+#endif
+
+
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
@@ -113,13 +131,30 @@ Foam::label Foam::scotchDecomp::decompose
{
// Strategy
// ~~~~~~~~
+
// Default.
SCOTCH_Strat stradat;
check(SCOTCH_stratInit(&stradat), "SCOTCH_stratInit");
- //SCOTCH_stratGraphMap(&stradat, &argv[i][2]);
- //fprintf(stdout, "S\tStrat=");
- //SCOTCH_stratSave(&stradat, stdout);
- //fprintf(stdout, "\n");
+
+ if (decompositionDict_.found("scotchCoeffs"))
+ {
+ const dictionary& scotchCoeffs =
+ decompositionDict_.subDict("scotchCoeffs");
+
+
+ string strategy;
+ if (scotchCoeffs.readIfPresent("strategy", strategy))
+ {
+ if (debug)
+ {
+ Info<< "scotchDecomp : Using strategy " << strategy << endl;
+ }
+ SCOTCH_stratGraphMap(&stradat, strategy.c_str());
+ //fprintf(stdout, "S\tStrat=");
+ //SCOTCH_stratSave(&stradat, stdout);
+ //fprintf(stdout, "\n");
+ }
+ }
// Graph
@@ -153,37 +188,40 @@ Foam::label Foam::scotchDecomp::decompose
const dictionary& scotchCoeffs =
decompositionDict_.subDict("scotchCoeffs");
- Switch writeGraph(scotchCoeffs.lookup("writeGraph"));
-
- if (writeGraph)
+ if (scotchCoeffs.found("writeGraph"))
{
- OFstream str(mesh_.time().path() / mesh_.name() + ".grf");
-
- Info<< "Dumping Scotch graph file to " << str.name() << endl
- << "Use this in combination with gpart." << endl;
-
- label version = 0;
- str << version << nl;
- // Numer of vertices
- str << xadj.size()-1 << ' ' << adjncy.size() << nl;
- // Numbering starts from 0
- label baseval = 0;
- // Has weights?
- label hasEdgeWeights = 0;
- label hasVertexWeights = 0;
- label numericflag = 10*hasEdgeWeights+hasVertexWeights;
- str << baseval << ' ' << numericflag << nl;
- for (label cellI = 0; cellI < xadj.size()-1; cellI++)
- {
- label start = xadj[cellI];
- label end = xadj[cellI+1];
- str << end-start;
+ Switch writeGraph(scotchCoeffs.lookup("writeGraph"));
- for (label i = start; i < end; i++)
+ if (writeGraph)
+ {
+ OFstream str(mesh_.time().path() / mesh_.name() + ".grf");
+
+ Info<< "Dumping Scotch graph file to " << str.name() << endl
+ << "Use this in combination with gpart." << endl;
+
+ label version = 0;
+ str << version << nl;
+ // Numer of vertices
+ str << xadj.size()-1 << ' ' << adjncy.size() << nl;
+ // Numbering starts from 0
+ label baseval = 0;
+ // Has weights?
+ label hasEdgeWeights = 0;
+ label hasVertexWeights = 0;
+ label numericflag = 10*hasEdgeWeights+hasVertexWeights;
+ str << baseval << ' ' << numericflag << nl;
+ for (label cellI = 0; cellI < xadj.size()-1; cellI++)
{
- str << ' ' << adjncy[i];
+ label start = xadj[cellI];
+ label end = xadj[cellI+1];
+ str << end-start;
+
+ for (label i = start; i < end; i++)
+ {
+ str << ' ' << adjncy[i];
+ }
+ str << nl;
}
- str << nl;
}
}
}
@@ -195,12 +233,36 @@ Foam::label Foam::scotchDecomp::decompose
SCOTCH_Arch archdat;
check(SCOTCH_archInit(&archdat), "SCOTCH_archInit");
- check
- (
- // SCOTCH_archCmpltw for weighted.
- SCOTCH_archCmplt(&archdat, nProcessors_),
- "SCOTCH_archCmplt"
- );
+
+ List<label> processorWeights;
+ if (decompositionDict_.found("scotchCoeffs"))
+ {
+ const dictionary& scotchCoeffs =
+ decompositionDict_.subDict("scotchCoeffs");
+
+ scotchCoeffs.readIfPresent("processorWeights", processorWeights);
+ }
+ if (processorWeights.size())
+ {
+ if (debug)
+ {
+ Info<< "scotchDecomp : Using procesor weights " << processorWeights
+ << endl;
+ }
+ check
+ (
+ SCOTCH_archCmpltw(&archdat, nProcessors_, processorWeights.begin()),
+ "SCOTCH_archCmpltw"
+ );
+ }
+ else
+ {
+ check
+ (
+ SCOTCH_archCmplt(&archdat, nProcessors_),
+ "SCOTCH_archCmplt"
+ );
+ }
//SCOTCH_Mapping mapdat;
@@ -209,6 +271,16 @@ Foam::label Foam::scotchDecomp::decompose
//SCOTCH_graphMapExit(&grafdat, &mapdat);
+ // Hack:switch off fpu error trapping
+# ifdef LINUX_GNUC
+ int oldExcepts = fedisableexcept
+ (
+ FE_DIVBYZERO
+ | FE_INVALID
+ | FE_OVERFLOW
+ );
+# endif
+
finalDecomp.setSize(xadj.size()-1);
finalDecomp = 0;
check
@@ -223,6 +295,11 @@ Foam::label Foam::scotchDecomp::decompose
"SCOTCH_graphMap"
);
+# ifdef LINUX_GNUC
+ feenableexcept(oldExcepts);
+# endif
+
+
//finalDecomp.setSize(xadj.size()-1);
//check
diff --git a/src/finiteVolume/fields/fvPatchFields/derived/fixedFluxBuoyantPressure/fixedFluxBuoyantPressureFvPatchScalarField.C b/src/finiteVolume/fields/fvPatchFields/derived/fixedFluxBuoyantPressure/fixedFluxBuoyantPressureFvPatchScalarField.C
index c31f5acc5c3888b49479e7f11b791ae28d51c25c..b6f48ff6ada8e214e41f83c848bafabdb32de46e 100644
--- a/src/finiteVolume/fields/fvPatchFields/derived/fixedFluxBuoyantPressure/fixedFluxBuoyantPressureFvPatchScalarField.C
+++ b/src/finiteVolume/fields/fvPatchFields/derived/fixedFluxBuoyantPressure/fixedFluxBuoyantPressureFvPatchScalarField.C
@@ -113,7 +113,17 @@ void fixedFluxBuoyantPressureFvPatchScalarField::updateCoeffs()
const fvPatchField<scalar>& rho =
patch().lookupPatchField<volScalarField, scalar>("rho");
- gradient() = -rho.snGrad()*(g.value() & patch().Cf());
+ // If the variable name is "pd" assume it is p - rho*g.h
+ // and set the gradient appropriately.
+ // Otherwise assume the variable is the static pressure.
+ if (dimensionedInternalField().name() == "pd")
+ {
+ gradient() = -rho.snGrad()*(g.value() & patch().Cf());
+ }
+ else
+ {
+ gradient() = rho*(g.value() & patch().nf());
+ }
fixedGradientFvPatchScalarField::updateCoeffs();
}
diff --git a/src/finiteVolume/fields/fvPatchFields/derived/fixedFluxBuoyantPressure/fixedFluxBuoyantPressureFvPatchScalarField.H b/src/finiteVolume/fields/fvPatchFields/derived/fixedFluxBuoyantPressure/fixedFluxBuoyantPressureFvPatchScalarField.H
index 3ce584bf873cef5a8a88804dd0076b82145be4c5..8e433cb8f167f0304ec840bb270c4521c9230e5b 100644
--- a/src/finiteVolume/fields/fvPatchFields/derived/fixedFluxBuoyantPressure/fixedFluxBuoyantPressureFvPatchScalarField.H
+++ b/src/finiteVolume/fields/fvPatchFields/derived/fixedFluxBuoyantPressure/fixedFluxBuoyantPressureFvPatchScalarField.H
@@ -26,7 +26,10 @@ Class
Foam::fixedFluxBuoyantPressureFvPatchScalarField
Description
- Foam::fixedFluxBuoyantPressureFvPatchScalarField
+ Set the pressure gradient boundary condition appropriately for buoyant flow.
+
+ If the variable name is "pd" assume it is p - rho*g.h and set the gradient
+ appropriately. Otherwise assume the variable is the static pressure.
SourceFiles
fixedFluxBuoyantPressureFvPatchScalarField.C
diff --git a/src/finiteVolume/fvMesh/extendedStencil/extendedStencil.C b/src/finiteVolume/fvMesh/extendedStencil/extendedStencil.C
index 1ff00db7ba44c2350e44de2b2845f8b563d491e6..38804ccbc104d07eefe56498a4a92f1ce4f27f99 100644
--- a/src/finiteVolume/fvMesh/extendedStencil/extendedStencil.C
+++ b/src/finiteVolume/fvMesh/extendedStencil/extendedStencil.C
@@ -31,168 +31,6 @@ License
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
-// Calculates per face a list of global cell/face indices.
-void Foam::extendedStencil::calcFaceStencil
-(
- const labelListList& globalCellCells,
- labelListList& faceStencil
-)
-{
- const polyBoundaryMesh& patches = mesh_.boundaryMesh();
- const label nBnd = mesh_.nFaces()-mesh_.nInternalFaces();
- const labelList& own = mesh_.faceOwner();
- const labelList& nei = mesh_.faceNeighbour();
-
-
- // Determine neighbouring global cell Cells
- // ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
- labelListList neiGlobalCellCells(nBnd);
- forAll(patches, patchI)
- {
- const polyPatch& pp = patches[patchI];
-
- if (pp.coupled())
- {
- label faceI = pp.start();
-
- forAll(pp, i)
- {
- neiGlobalCellCells[faceI-mesh_.nInternalFaces()] =
- globalCellCells[own[faceI]];
- faceI++;
- }
- }
- }
- syncTools::swapBoundaryFaceList(mesh_, neiGlobalCellCells, false);
-
-
-
- // Construct stencil in global numbering
- // ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
- faceStencil.setSize(mesh_.nFaces());
-
- labelHashSet faceStencilSet;
-
- for (label faceI = 0; faceI < mesh_.nInternalFaces(); faceI++)
- {
- faceStencilSet.clear();
-
- const labelList& ownCCells = globalCellCells[own[faceI]];
- label globalOwn = ownCCells[0];
- // Insert cellCells
- forAll(ownCCells, i)
- {
- faceStencilSet.insert(ownCCells[i]);
- }
-
- const labelList& neiCCells = globalCellCells[nei[faceI]];
- label globalNei = neiCCells[0];
- // Insert cellCells
- forAll(neiCCells, i)
- {
- faceStencilSet.insert(neiCCells[i]);
- }
-
- // Guarantee owner first, neighbour second.
- faceStencil[faceI].setSize(faceStencilSet.size());
- label n = 0;
- faceStencil[faceI][n++] = globalOwn;
- faceStencil[faceI][n++] = globalNei;
- forAllConstIter(labelHashSet, faceStencilSet, iter)
- {
- if (iter.key() != globalOwn && iter.key() != globalNei)
- {
- faceStencil[faceI][n++] = iter.key();
- }
- }
- //Pout<< "internalface:" << faceI << " toc:" << faceStencilSet.toc()
- // << " faceStencil:" << faceStencil[faceI] << endl;
- }
- forAll(patches, patchI)
- {
- const polyPatch& pp = patches[patchI];
- label faceI = pp.start();
-
- if (pp.coupled())
- {
- forAll(pp, i)
- {
- faceStencilSet.clear();
-
- const labelList& ownCCells = globalCellCells[own[faceI]];
- label globalOwn = ownCCells[0];
- forAll(ownCCells, i)
- {
- faceStencilSet.insert(ownCCells[i]);
- }
-
- // And the neighbours of the coupled cell
- const labelList& neiCCells =
- neiGlobalCellCells[faceI-mesh_.nInternalFaces()];
- label globalNei = neiCCells[0];
- forAll(neiCCells, i)
- {
- faceStencilSet.insert(neiCCells[i]);
- }
-
- // Guarantee owner first, neighbour second.
- faceStencil[faceI].setSize(faceStencilSet.size());
- label n = 0;
- faceStencil[faceI][n++] = globalOwn;
- faceStencil[faceI][n++] = globalNei;
- forAllConstIter(labelHashSet, faceStencilSet, iter)
- {
- if (iter.key() != globalOwn && iter.key() != globalNei)
- {
- faceStencil[faceI][n++] = iter.key();
- }
- }
-
- //Pout<< "coupledface:" << faceI
- // << " toc:" << faceStencilSet.toc()
- // << " faceStencil:" << faceStencil[faceI] << endl;
-
- faceI++;
- }
- }
- else if (!isA<emptyPolyPatch>(pp))
- {
- forAll(pp, i)
- {
- faceStencilSet.clear();
-
- const labelList& ownCCells = globalCellCells[own[faceI]];
- label globalOwn = ownCCells[0];
- forAll(ownCCells, i)
- {
- faceStencilSet.insert(ownCCells[i]);
- }
-
- // Guarantee owner first, neighbour second.
- faceStencil[faceI].setSize(faceStencilSet.size());
- label n = 0;
- faceStencil[faceI][n++] = globalOwn;
- forAllConstIter(labelHashSet, faceStencilSet, iter)
- {
- if (iter.key() != globalOwn)
- {
- faceStencil[faceI][n++] = iter.key();
- }
- }
-
- //Pout<< "boundaryface:" << faceI
- // << " toc:" << faceStencilSet.toc()
- // << " faceStencil:" << faceStencil[faceI] << endl;
-
- faceI++;
- }
- }
- }
-}
-
-
Foam::autoPtr<Foam::mapDistribute> Foam::extendedStencil::calcDistributeMap
(
const globalIndex& globalNumbering,
diff --git a/src/finiteVolume/fvMesh/extendedStencil/extendedStencil.H b/src/finiteVolume/fvMesh/extendedStencil/extendedStencil.H
index 6faff8f3a6c7219a69b594250d78c58476136637..a1c6d41474ed01ce6565afaf06b97427c7dbdc06 100644
--- a/src/finiteVolume/fvMesh/extendedStencil/extendedStencil.H
+++ b/src/finiteVolume/fvMesh/extendedStencil/extendedStencil.H
@@ -75,13 +75,6 @@ protected:
// Protected Member Functions
- //- Collect cell neighbours into extended stencil
- void calcFaceStencil
- (
- const labelListList& globalCellCells,
- labelListList& faceStencil
- );
-
//- Calculate distribute map
autoPtr<mapDistribute> calcDistributeMap
(
diff --git a/src/finiteVolume/interpolation/surfaceInterpolation/schemes/FitData/FitData.C b/src/finiteVolume/interpolation/surfaceInterpolation/schemes/FitData/FitData.C
index 18585bc645d1db5b13784960fd315f3e8165d824..7f432462b1376577857571a4c3a6d365b86c6524 100644
--- a/src/finiteVolume/interpolation/surfaceInterpolation/schemes/FitData/FitData.C
+++ b/src/finiteVolume/interpolation/surfaceInterpolation/schemes/FitData/FitData.C
@@ -191,6 +191,13 @@ void Foam::FitData<FitDataType, ExtendedStencil, Polynomial>::calcFit
);
}
+ // Additional weighting for constant and linear terms
+ for(label i = 0; i < B.n(); i++)
+ {
+ B[i][0] *= wts[0];
+ B[i][1] *= wts[0];
+ }
+
// Set the fit
label stencilSize = C.size();
coeffsi.setSize(stencilSize);
@@ -205,7 +212,7 @@ void Foam::FitData<FitDataType, ExtendedStencil, Polynomial>::calcFit
for(label i=0; i<stencilSize; i++)
{
- coeffsi[i] = wts[i]*svd.VSinvUt()[0][i];
+ coeffsi[i] = wts[0]*wts[i]*svd.VSinvUt()[0][i];
if (mag(coeffsi[i]) > maxCoeff)
{
maxCoeff = mag(coeffsi[i]);
@@ -229,7 +236,8 @@ void Foam::FitData<FitDataType, ExtendedStencil, Polynomial>::calcFit
// << " sing vals " << svd.S() << endl;
// }
- if (!goodFit) // (not good fit so increase weight in the centre)
+ if (!goodFit) // (not good fit so increase weight in the centre and weight
+ // for constant and linear terms)
{
// if (iIt == 7)
// {
@@ -237,7 +245,10 @@ void Foam::FitData<FitDataType, ExtendedStencil, Polynomial>::calcFit
// (
// "FitData<Polynomial>::calcFit"
// "(const List<point>& C, const label facei"
- // ) << "Cannot fit face " << facei
+ // ) << "Cannot fit face " << facei << " iteration " << iIt
+ // << " with sum of weights " << sum(coeffsi) << nl
+ // << " Weights " << coeffsi << nl
+ // << " Linear weights " << wLin << " " << 1 - wLin << nl
// << " sing vals " << svd.S() << endl;
// }
@@ -249,6 +260,12 @@ void Foam::FitData<FitDataType, ExtendedStencil, Polynomial>::calcFit
B[0][j] *= 10;
B[1][j] *= 10;
}
+
+ for(label i = 0; i < B.n(); i++)
+ {
+ B[i][0] *= 10;
+ B[i][1] *= 10;
+ }
}
}
diff --git a/src/lagrangian/coalCombustion/Make/files b/src/lagrangian/coalCombustion/Make/files
index c8fb192aea89081987d98a244d718aeb2b0d897e..b31ee16529164c5642272756982255d03f9312fc 100755
--- a/src/lagrangian/coalCombustion/Make/files
+++ b/src/lagrangian/coalCombustion/Make/files
@@ -19,4 +19,4 @@ submodels/surfaceReactionModel/COxidationKineticDiffusionLimitedRate/COxidationK
submodels/surfaceReactionModel/COxidationMurphyShaddix/COxidationMurphyShaddix.C
-LIB = $(FOAM_USER_LIBBIN)/libcoalCombustion
+LIB = $(FOAM_LIBBIN)/libcoalCombustion
diff --git a/src/lagrangian/intermediate/parcels/Templates/ReactingMultiphaseParcel/ReactingMultiphaseParcelIO.C b/src/lagrangian/intermediate/parcels/Templates/ReactingMultiphaseParcel/ReactingMultiphaseParcelIO.C
index bbf58e49a04cfd0ccf3891ea318cf5824b6d2557..b836c1c412663db6213081458eee60b883b3cfe4 100644
--- a/src/lagrangian/intermediate/parcels/Templates/ReactingMultiphaseParcel/ReactingMultiphaseParcelIO.C
+++ b/src/lagrangian/intermediate/parcels/Templates/ReactingMultiphaseParcel/ReactingMultiphaseParcelIO.C
@@ -276,15 +276,15 @@ Foam::Ostream& Foam::operator<<
scalarField YSolidLoc = p.YSolid()*p.Y()[2];
if (os.format() == IOstream::ASCII)
{
- os << static_cast<const ReactingMultiphaseParcel<ParcelType>&>(p)
+ os << static_cast<const ReactingParcel<ParcelType>&>(p)
<< token::SPACE << YGasLoc
<< token::SPACE << YLiquidLoc
<< token::SPACE << YSolidLoc;
}
else
{
- os << static_cast<const ReactingMultiphaseParcel<ParcelType>&>(p);
- os << YGasLoc << YLiquidLoc << YSolidLoc;
+ os << static_cast<const ReactingParcel<ParcelType>&>(p);
+ os << YGasLoc << YLiquidLoc << YSolidLoc;
}
// Check state of Ostream