ENH: applyBoundaryLayer - determine compressibility automatically by the presence of a thermophysicalProperties file

Uses a system/caseProperties file to select templates from
etc/caseDicts/createZeroDirectoryTemplates to enable high-level setup
of a case.
See
- etc/caseDicts/createZeroDirectoryTemplates
- tutorials/preProcessing/createZeroDirectory

- moved control to functionObject (from bc)
- this allows multi-region support
- see heatTransfer/chtMultiRegionFoam/externalCoupledMultiRegionHeater tut
- generalisation of streamed reading/writing of specialised bcs

- moved control to functionObject (from bc)
- this allows multi-region support
- see heatTransfer/chtMultiRegionFoam/externalCoupledMultiRegionHeater tut
- generalisation of streamed reading/writing of specialised bcs

- bounds option (see $FOAM_UTILITIES/postProcessing/sampling/sample/sampleDict)
- fixes memory error http://www.openfoam.org/mantisbt/view.php?id=1487
- cleans up iso surface normal orientation

moveDynamicMesh: Iterate over mesh.update() according to the PIMPLE settings Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1926

- foamyHexMesh
- snappyHexMesh
- decomposePar

- foamyHexMesh
- snappyHexMesh
- decomposePar

- checkMesh has option to write faceSets or (outside of) cellSets as
sampledSurface format. It automatically reconstructs the set on the master
and writes it to the postProcessing folder (as any sampledSurface). E.g.

    mpirun -np 6 checkMesh -allTopology -allGeometry -writeSets vtk -parallel

- fixed order writing of symmTensor in Ensight writers

- shm: have displacementMotionSolver as alternative mesh shrinker
  (instead of medialAxis).
- updated iglooWithFridges tutorial to use displacementLaplacian
- selectable interpolation from cells to points in the motion solvers
  using the 'interpolation' keyword:
    interpolation volPointInterpolation;    // default
    or
    interpolation patchCorrected (lowerWall upperWall);
- wrapped up mesh shrinkers (see above) for use as a displacementMotionSolver
  (i.e. the opposite of the displacementMotionSolver mesh shrinker)

- shm: have displacementMotionSolver as alternative mesh shrinker
  (instead of medialAxis).
- updated iglooWithFridges tutorial to use displacementLaplacian
- selectable interpolation from cells to points in the motion solvers
  using the 'interpolation' keyword:
    interpolation volPointInterpolation;    // default
    or
    interpolation patchCorrected (lowerWall upperWall);
- wrapped up mesh shrinkers (see above) for use as a displacementMotionSolver
  (i.e. the opposite of the displacementMotionSolver mesh shrinker)

- shm: have displacementMotionSolver as alternative mesh shrinker
  (instead of medialAxis).
- updated iglooWithFridges tutorial to use displacementLaplacian
- selectable interpolation from cells to points in the motion solvers
  using the 'interpolation' keyword:
    interpolation volPointInterpolation;    // default
    or
    interpolation patchCorrected (lowerWall upperWall);
- wrapped up mesh shrinkers (see above) for use as a displacementMotionSolver
  (i.e. the opposite of the displacementMotionSolver mesh shrinker)

- redistributePar to have almost (complete) functionality of decomposePar+reconstructPar
- low-level distributed Field mapping
- support for mapping surfaceFields (including flipping faces)
- support for decomposing/reconstructing refinement data

- redistributePar to have almost (complete) functionality of decomposePar+reconstructPar
- low-level distributed Field mapping
- support for mapping surfaceFields (including flipping faces)
- support for decomposing/reconstructing refinement data

- redistributePar to have almost (complete) functionality of decomposePar+reconstructPar
- low-level distributed Field mapping
- support for mapping surfaceFields (including flipping faces)
- support for decomposing/reconstructing refinement data

- redistributePar to have almost (complete) functionality of decomposePar+reconstructPar
- low-level distributed Field mapping
- support for mapping surfaceFields (including flipping faces)
- support for decomposing/reconstructing refinement data

surfaceBooleanFeatures: use CGAL for intersection
surfaceCheck: write surface zoning as vtk file
surfaceInflate: new utility to offset surface
surfacePatch: replacement for surfaceAutoPatch. Also does cutting of surfaces.

XiDyMFoam               : compressible version of XiFoam
oscillatingCylinder     : 2D case with cylinder moving up and down
annularCombustorTurbine : part of 3D combuster using cyclicPeriodicAMI

1. multi-ray shooting. It now shoots rays in all the 3 coordinate directions
from the cell centre. Before it would shoot just a single ray from the
nearest point on the surface, going through the cell centre.

There is a cost overhead in that now it shoots 6 rays (+-x, +-y, +-z)
instead of just 1.

2. bleeding of refinement. It marks the cells inside a gap and walks out
the gap-size to neighbouring cells (which are just outside the gap). This
should make for a smoother refinement pattern.

The built-in explicit symplectic integrator has been replaced by a
general framework supporting run-time selectable integrators.  Currently
the explicit symplectic, implicit Crank-Nicolson and implicit Newmark
methods are provided, all of which are 2nd-order in time:

Symplectic 2nd-order explicit time-integrator for 6DoF solid-body motion:

    Reference:
        Dullweber, A., Leimkuhler, B., & McLachlan, R. (1997).
        Symplectic splitting methods for rigid body molecular dynamics.
        The Journal of chemical physics, 107(15), 5840-5851.

    Can only be used for explicit integration of the motion of the body,
    i.e. may only be called once per time-step, no outer-correctors may be
    applied.  For implicit integration with outer-correctors choose either
    CrankNicolson or Newmark schemes.

    Example specification in dynamicMeshDict:
    solver
    {
        type    symplectic;
    }

Newmark 2nd-order time-i...

Ur can be generated using a functionObject or in the post-processor

Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1868

Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1872