Commit 376a2b66 authored by mark's avatar mark
Browse files

GIT: Merge in foundation/master with cleanup (2016-06-14)

The ThirdParty repository from the Foundation now includes some
3rd-party source code (paraview, scotch) as well.

To avoid this bloat (ca. 50MB), now and in the future, it is
unfortunately necessary to break the linear history and the direct
connection with the Foundation repository.

This commit is a squashed merge of the current Foundation master branch
with some minor adjustments.

Stop tracking of the derived README.html file.

===========================================================================
Changes prior to merge:

commit 3cb21d12be069561fbe13461440cbdf1c8b188d5
Author: mark <mark@opencfd>
Date:   Tue Jun 14 17:18:40 2016 +0200

    GIT: rationalize .gitignore

    - do not track derived content.
    - do track wmake files etc. (re-instates some content)

commit d1bf108bea922bf60a1002c4641770b91f09f226
Author: Henry Weller <http://cfd.direct>
Date:   Sat Nov 7 21:44:27 2015 +0000

    Reinstated Qt build scripts
    Resolves bug-re...
parent e321e17f
# man gitignore for more information
# editor and misc backup files - anywhere
# Ignore editor and misc backup files - anywhere
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linuxming*/
SiCortex*Gcc*/
solaris*Gcc*/
SunOS*Gcc*/
# source packages - anywhere
# Ignore source packages - anywhere
*.tar.bz2
*.tar.gz
*.tar
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# Ignore build and platforms folders
build/
platforms/
# ignore the persistent .build tag in the main directory
/.build
# ignore .timeStamp in the main directory
/.timeStamp
# Generated files in the main directory
/*.html
# ignore unpacked sources in the main directory (match pkg-ver)
# Ignore unpacked sources in the main directory (match pkg-ver)
# this also matches symlinks
/*[-_][0-9]*
# ignore all sub-directories
# Ignore all top-level sub-directories
/*/
# do not ignore these ones
# Do not ignore these ones though
!/etc/
# do not ignore the first level of these ones
!/malloc/
/malloc/*/
!/malloc/fbsdmalloc/
# ignore these extra symlinks
libccmio
# track this patched version directly - until metis gets dropped
!/metis-5.0pre2/libmetis/metislib.h
# end-of-file
# End-of-file
......@@ -59,4 +59,4 @@ done
[ -d platforms ] && ( set -x; rm -rf platforms/* )
# ----------------------------------------------------------------- end-of-file
#------------------------------------------------------------------------------
......@@ -3,7 +3,7 @@
# ========= |
# \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
# \\ / O peration |
# \\ / A nd | Copyright (C) 2011-2014 OpenFOAM Foundation
# \\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
# \\/ M anipulation |
#------------------------------------------------------------------------------
# License
......@@ -77,7 +77,7 @@ OPENMPI)
set -x
cd "${MPI_ARCH_PATH##*/}" || exit 1 # change to openmpi-VERSION
make distclean 2>/dev/null
[ -e Makefile ] && make distclean 2>/dev/null
rm -rf $MPI_ARCH_PATH
# start with GridEngine support,
......@@ -122,7 +122,7 @@ MPICH)
set -x
cd $MPI_HOME || exit 1 # change to mpich-VERSION
make distclean 2>/dev/null
[ -e Makefile ] && make distclean 2>/dev/null
rm -rf $MPI_ARCH_PATH
rm util/machines/machines.*
......@@ -173,12 +173,12 @@ esac
# get SCOTCH_VERSION, SCOTCH_ARCH_PATH
if settings=`$WM_PROJECT_DIR/bin/foamEtcFile config/scotch.sh`
if settings=`$WM_PROJECT_DIR/bin/foamEtcFile config.sh/scotch`
then
. $settings
else
echo
echo "Error: no config/scotch.sh settings"
echo "Error: no config.sh/scotch settings"
echo
fi
......@@ -306,14 +306,14 @@ then
fi
# -----------------------------------------------------------------------------
#------------------------------------------------------------------------------
# Metis is optional
echo ========================================
echo Build Metis decomposition
# get METIS_VERSION, METIS_ARCH_PATH
if settings=`$WM_PROJECT_DIR/bin/foamEtcFile config/metis.sh`
if settings=`$WM_PROJECT_DIR/bin/foamEtcFile config.sh/metis`
then
. $settings
fi
......@@ -330,6 +330,24 @@ then
(
set -x
cd $METIS_VERSION || exit 1
if [ "$WM_PRECISION_OPTION" = "DP" ]
then
FLOAT_PRECISION=64
elif [ "$WM_PRECISION_OPTION" = "SP" ]
then
FLOAT_PRECISION=32
else
echo " Metis pre-configure error:"
echo " WM_PRECISION_OPTION is neither DP nor SP"
exit 1
fi
# Change user settings automatically
sed -i -e 's=\(#define IDXTYPEWIDTH\).*=\1 '$WM_LABEL_SIZE'=' \
-e 's=\(#define REALTYPEWIDTH\).*=\1 '$FLOAT_PRECISION'=' \
include/metis.h
make config shared=1 prefix=$METIS_ARCH_PATH
make -j $WM_NCOMPPROCS install
cp $METIS_ARCH_PATH/lib/libmetis.so $FOAM_EXT_LIBBIN
......@@ -365,4 +383,4 @@ echo ========================================
echo
# ----------------------------------------------------------------- end-of-file
#------------------------------------------------------------------------------
......@@ -3,7 +3,7 @@
# ========= |
# \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
# \\ / O peration |
# \\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
# \\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
# \\/ M anipulation |
#------------------------------------------------------------------------------
# License
......@@ -26,7 +26,7 @@
# AllwmakeLibccmio
#
# Description
# Get and build CD-adapco's ccmio library
# Build CD-adapco's ccmio library
#
#------------------------------------------------------------------------------
packageDir=libccmio-2.6.1
......@@ -82,4 +82,4 @@ set -x
)
# ----------------------------------------------------------------- end-of-file
#------------------------------------------------------------------------------
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<head>
<title>OpenFOAM-3.0.x Third-Party packages</title>
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FOR A PARTICULAR PURPOSE. See the GNU GPL for more details.
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</head>
<body>
<div id="content">
<h1 class="title">OpenFOAM-3.0.x Third-Party packages</h1>
<div id="table-of-contents">
<h2>Table of Contents</h2>
<div id="text-table-of-contents">
<ul>
<li><a href="#sec-1">1. Description</a></li>
<li><a href="#sec-2">2. Order of execution:</a>
<ul>
<li><a href="#sec-2-1">2.1. Optional</a></li>
</ul>
</li>
<li><a href="#sec-3">3. Versions and locations to download the third party packages</a>
<ul>
<li><a href="#sec-3-1">3.1. Gcc C++ Compiler</a></li>
<li><a href="#sec-3-2">3.2. Parallel Processing</a></li>
<li><a href="#sec-3-3">3.3. ParaView</a></li>
<li><a href="#sec-3-4">3.4. CGAL</a></li>
<li><a href="#sec-3-5">3.5. Miscellaneous</a></li>
</ul>
</li>
<li><a href="#sec-4">4. Notes</a>
<ul>
<li><a href="#sec-4-1">4.1. Building ParaView-4.3.1/4.4.0</a></li>
<li><a href="#sec-4-2">4.2. Building ParaView-4.1.0</a></li>
</ul>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-1" class="outline-2">
<h2 id="sec-1"><span class="section-number-2">1</span> Description</h2>
<div class="outline-text-2" id="text-1">
<p>
Scripts for building third-party packages.
</p>
</div>
</div>
<div id="outline-container-sec-2" class="outline-2">
<h2 id="sec-2"><span class="section-number-2">2</span> Order of execution:</h2>
<div class="outline-text-2" id="text-2">
<ul class="org-ul">
<li>makeGcc (recommended if the system gcc is &lt; 4.7)
</li>
<li>Allwmake (Builds OpenMPI, Scotch etc.)
</li>
<li>makeCmake (if the system cmake version is &lt; 2.8.8)
</li>
<li>makeParaView4
</li>
</ul>
</div>
<div id="outline-container-sec-2-1" class="outline-3">
<h3 id="sec-2-1"><span class="section-number-3">2.1</span> Optional</h3>
<div class="outline-text-3" id="text-2-1">
<ul class="org-ul">
<li>AllwmakeLibccmio (Only required for conversion of STAR-CCM+ meshes)
</li>
<li>Allclean (Only required to save disk space)
</li>
</ul>
</div>
</div>
</div>
<div id="outline-container-sec-3" class="outline-2">
<h2 id="sec-3"><span class="section-number-2">3</span> Versions and locations to download the third party packages</h2>
<div class="outline-text-2" id="text-3">
</div><div id="outline-container-sec-3-1" class="outline-3">
<h3 id="sec-3-1"><span class="section-number-3">3.1</span> Gcc C++ Compiler</h3>
<div class="outline-text-3" id="text-3-1">
<p>
The minimum version of gcc required is 4.5.0
</p>
<ul class="org-ul">
<li>gcc <a href="http://gcc.gnu.org/releases.html">http://gcc.gnu.org/releases.html</a>
</li>
<li>gmp <a href="http://gmplib.org/">http://gmplib.org/</a>
<a href="ftp://ftp.gnu.org/gnu/gmp/gmp-5.1.2.tar.bz2">ftp://ftp.gnu.org/gnu/gmp/gmp-5.1.2.tar.bz2</a>
</li>
<li>mpfr <a href="http://www.mpfr.org/">http://www.mpfr.org/</a>
<a href="ftp://ftp.gnu.org/gnu/mpfr/mpfr-3.1.2.tar.bz2">ftp://ftp.gnu.org/gnu/mpfr/mpfr-3.1.2.tar.bz2</a>
</li>
<li>mpc <a href="http://www.multiprecision.org/">http://www.multiprecision.org/</a>
<a href="http://www.multiprecision.org/mpc/download/mpc-1.0.1.tar.gz">http://www.multiprecision.org/mpc/download/mpc-1.0.1.tar.gz</a>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-3-2" class="outline-3">
<h3 id="sec-3-2"><span class="section-number-3">3.2</span> Parallel Processing</h3>
<div class="outline-text-3" id="text-3-2">
<ul class="org-ul">
<li>OpenMPI: <a href="http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.0.tar.bz2">http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.0.tar.bz2</a>
</li>
<li>Scotch/PtScotch: <a href="https://gforge.inria.fr/frs/download.php/file/34099/scotch_6.0.3.tar.gz">https://gforge.inria.fr/frs/download.php/file/34099/scotch_6.0.3.tar.gz</a>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-3-3" class="outline-3">
<h3 id="sec-3-3"><span class="section-number-3">3.3</span> ParaView</h3>
<div class="outline-text-3" id="text-3-3">
<ul class="org-ul">
<li>cmake <a href="http://www.cmake.org/files/v3.2/cmake-3.2.1.tar.gz">http://www.cmake.org/files/v3.2/cmake-3.2.1.tar.gz</a>
</li>
<li>ParaView <a href="http://www.paraview.org/files/v4.4/ParaView-v4.4.0-source.tar.gz">http://www.paraview.org/files/v4.4/ParaView-v4.4.0-source.tar.gz</a>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-3-4" class="outline-3">
<h3 id="sec-3-4"><span class="section-number-3">3.4</span> CGAL</h3>
<div class="outline-text-3" id="text-3-4">
<ul class="org-ul">
<li>CGAL <a href="https://github.com/CGAL/cgal/releases/download/releases/CGAL-4.7/CGAL-4.7.tar.xz">https://github.com/CGAL/cgal/releases/download/releases/CGAL-4.7/CGAL-4.7.tar.xz</a>
</li>
<li>boost <a href="http://sourceforge.net/projects/boost/files/boost/1.55.0/boost_1_55_0.tar.bz2/download">http://sourceforge.net/projects/boost/files/boost/1.55.0/boost_1_55_0.tar.bz2/download</a>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-3-5" class="outline-3">
<h3 id="sec-3-5"><span class="section-number-3">3.5</span> Miscellaneous</h3>
<div class="outline-text-3" id="text-3-5">
<ul class="org-ul">
<li>libccmio <a href="http://portal.nersc.gov/svn/visit/trunk/third_party/libccmio-2.6.1.tar.gz">http://portal.nersc.gov/svn/visit/trunk/third_party/libccmio-2.6.1.tar.gz</a>
</li>
</ul>
</div>
</div>
</div>
<div id="outline-container-sec-4" class="outline-2">
<h2 id="sec-4"><span class="section-number-2">4</span> Notes</h2>
<div class="outline-text-2" id="text-4">
</div><div id="outline-container-sec-4-1" class="outline-3">
<h3 id="sec-4-1"><span class="section-number-3">4.1</span> Building ParaView-4.3.1/4.4.0</h3>
<div class="outline-text-3" id="text-4-1">
<p>
The ParaView-4.3.1/4.4.0 source-pack provided by KitWare will not build and
install correctly without a minor correction: lines 653-656 must be removed
or commented from file
<i>ThirdParty-3.0.0/ParaView-4.?.?/Qt/Components/CMakeLists.txt</i> after
unpacking and renaming the ParaView-4.?.? directory. This is because the
file ui_pqExportStateWizard.h referred to in the lines 653-656:
</p>
<div class="org-src-container">
<pre class="src src-C"><span style="color: #0000cd; font-weight: bold;">if</span>(PARAVIEW_INSTALL_DEVELOPMENT_FILES)
install(FILES <span style="color: #008b00;">"${CMAKE_CURRENT_BINARY_DIR}/ui_pqExportStateWizard.h"</span>
DESTINATION <span style="color: #008b00;">"${VTK_INSTALL_INCLUDE_DIR}"</span>)
endif()
</pre>
</div>
<p>
does not exist and cannot be installed causing the build and installation to
fail.
</p>
<p>
Additionally for ParaView-4.4.0 there is a bug in the STL reader which can
be patched by running the following command from within the ThirdParty-???
directory:
</p>
<ul class="org-ul">
<li>wget <a href="https://raw.githubusercontent.com/Kitware/VTK/40937e934308e5009e80769dc0c451ee4f157749/IO/Geometry/vtkSTLReader.cxx">https://raw.githubusercontent.com/Kitware/VTK/40937e934308e5009e80769dc0c451ee4f157749/IO/Geometry/vtkSTLReader.cxx</a> -O ParaView-4.4.0/VTK/IO/Geometry/vtkSTLReader.cxx
</li>
</ul>
<p>
See also <a href="http://www.openfoam.org/mantisbt/view.php?id=1887">http://www.openfoam.org/mantisbt/view.php?id=1887</a>
</p>
</div>
</div>
<div id="outline-container-sec-4-2" class="outline-3">
<h3 id="sec-4-2"><span class="section-number-3">4.2</span> Building ParaView-4.1.0</h3>
<div class="outline-text-3" id="text-4-2">
<p>
On Ubuntu 14.10 and higher, OpenSuSE 13.2 and probably other recent
GNU/Linux distributions there is an issue in the GL libraries requiring a
change to the vtkXOpenGLRenderWindow.cxx file in ParaView: Uncomment line 30
</p>
<p>
#define GLX_GLXEXT_LEGACY
</p>
</div>
</div>
</div>
</div>
<div id="postamble" class="status">
<p class="date">Date: 3rd November 2015</p>
<p class="date">Created: 2015-11-03 Tue 17:54</p>
<p class="creator"><a href="http://www.gnu.org/software/emacs/">Emacs</a> 24.5 (<a href="http://orgmode.org">Org</a> mode 8.2.10)</p>
<p class="validation"><a href="http://validator.w3.org/check?uri=referer">Validate</a></p>
</div>
</body>
</html>
# -*- mode: org; -*-
#
#+TITLE: OpenFOAM-3.0.x Third-Party packages
#+TITLE: OpenFOAM Third-Party packages
#+AUTHOR: The OpenFOAM Foundation
#+DATE: 3rd November 2015
#+DATE: 31th May 2016
#+LINK: http://www.openfoam.org
#+OPTIONS: author:nil ^:{}
# Copyright (c) 2015 OpenFOAM Foundation.
# Copyright (c) 2014-2016 OpenFOAM Foundation.
* Description
Scripts for building third-party packages.
......@@ -13,7 +13,7 @@
+ makeGcc (recommended if the system gcc is < 4.7)
+ Allwmake (Builds OpenMPI, Scotch etc.)
+ makeCmake (if the system cmake version is < 2.8.8)
+ makeParaView4
+ makeParaView
*** Optional
+ AllwmakeLibccmio (Only required for conversion of STAR-CCM+ meshes)
+ Allclean (Only required to save disk space)
......@@ -28,24 +28,29 @@
+ mpc http://www.multiprecision.org/
http://www.multiprecision.org/mpc/download/mpc-1.0.1.tar.gz
*** Parallel Processing
+ OpenMPI: http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.0.tar.bz2
+ Scotch/PtScotch: https://gforge.inria.fr/frs/download.php/file/34099/scotch_6.0.3.tar.gz
***** Scotch
+ Scotch/PtScotch: https://gforge.inria.fr/frs/download.php/file/34099/scotch_6.0.3.tar.gz
***** OpenMPI
+ OpenMPI: http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.2.tar.bz2
*** ParaView
+ cmake http://www.cmake.org/files/v3.2/cmake-3.2.1.tar.gz
+ ParaView http://www.paraview.org/files/v4.4/ParaView-v4.4.0-source.tar.gz
+ cmake http://www.cmake.org/files/v3.2/cmake-3.2.1.tar.gz
+ ParaView-4.4.0 http://www.paraview.org/files/v4.4/ParaView-v4.4.0-source.tar.gz
+ ParaView-5.0.1 http://www.paraview.org/files/v5.0/ParaView-v5.0.1-source.tar.gz
but may need patching to compile (See [[Notes]]).
*** CGAL
+ CGAL https://github.com/CGAL/cgal/releases/download/releases%2FCGAL-4.7/CGAL-4.7.tar.xz
+ CGAL https://github.com/CGAL/cgal/releases/download/releases%2FCGAL-4.8/CGAL-4.8.tar.xz
+ boost http://sourceforge.net/projects/boost/files/boost/1.55.0/boost_1_55_0.tar.bz2/download
*** Miscellaneous
+ libccmio http://portal.nersc.gov/svn/visit/trunk/third_party/libccmio-2.6.1.tar.gz
* Notes
*** Building ParaView-4.3.1/4.4.0
The ParaView-4.3.1/4.4.0 source-pack provided by KitWare will not build and
install correctly without a minor correction: lines 653-656 must be removed
or commented from file
/ThirdParty-3.0.0/ParaView-4.?.?/Qt/Components/CMakeLists.txt/ after
unpacking and renaming the ParaView-4.?.? directory. This is because the
file ui_pqExportStateWizard.h referred to in the lines 653-656:
*** Building ParaView-4.3.1/4.4.0/5.0.0/5.0.1
The ParaView-4.3.1/4.4.0/5.0.0 source-pack provided by KitWare will not
build and install correctly without a minor correction: lines 653-656
(650-653 in ParaView-5.0.0, 659-662 in ParaView-5.0.1) must be removed or
commented from file
/ThirdParty-???/ParaView-[45].?.?/Qt/Components/CMakeLists.txt/ after
unpacking and renaming the ParaView-[45].?.? directory. This is because the
file ui_pqExportStateWizard.h referred to in
#+begin_src C
if(PARAVIEW_INSTALL_DEVELOPMENT_FILES)
install(FILES "${CMAKE_CURRENT_BINARY_DIR}/ui_pqExportStateWizard.h"
......@@ -60,7 +65,17 @@
directory:
+ wget https://raw.githubusercontent.com/Kitware/VTK/40937e934308e5009e80769dc0c451ee4f157749/IO/Geometry/vtkSTLReader.cxx -O ParaView-4.4.0/VTK/IO/Geometry/vtkSTLReader.cxx
See also http://www.openfoam.org/mantisbt/view.php?id=1887
*** Building ParaView-5.0.1 with gcc-6.1.0
***** Add support for gcc-6.?.?
The following cmake files
+ ParaView-5.0.1/VTK/CMake/vtkCompilerExtras.cmake
+ ParaView-5.0.1/VTK/CMake/GenerateExportHeader.cmake
specifically limit the gcc versions supported. To add support gcc-6.?.?
replace '[345]' with '[3456]'
***** SciberQuestToolKit
The SciberQuestToolKit plugin fails to compile with gcc-6.1.0 and causes
the compilation of ParaView to halt. The easiest solution is to delete
the ParaView-5.0.1/Plugins/SciberQuestToolKit directory.
*** Building ParaView-4.1.0
On Ubuntu 14.10 and higher, OpenSuSE 13.2 and probably other recent
GNU/Linux distributions there is an issue in the GL libraries requiring a
......
......@@ -2,7 +2,7 @@
# ========= |
# \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
# \\ / O peration |
# \\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
# \\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
# \\/ M anipulation |
#------------------------------------------------------------------------------
# License
......@@ -63,6 +63,9 @@ setDirs()
echo "ParaView_SOURCE_DIR=$ParaView_SOURCE_DIR"
echo "ParaView_BINARY_DIR=$ParaView_BINARY_DIR"
echo "ParaView_DIR=$ParaView_DIR"