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/*---------------------------------------------------------------------------*\
  =========                 |
  \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
   \\    /   O peration     |
    \\  /    A nd           | Copyright (C) 2011-2013 OpenFOAM Foundation
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     \\/     M anipulation  |
-------------------------------------------------------------------------------
License
    This file is part of OpenFOAM.

    OpenFOAM is free software: you can redistribute it and/or modify it
    under the terms of the GNU General Public License as published by
    the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.

    OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
    FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
    for more details.

    You should have received a copy of the GNU General Public License
    along with OpenFOAM.  If not, see <http://www.gnu.org/licenses/>.

\*---------------------------------------------------------------------------*/

#include "multiphaseSystem.H"
#include "alphaContactAngleFvPatchScalarField.H"
#include "fixedValueFvsPatchFields.H"
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#include "Time.H"
#include "subCycle.H"
#include "MULES.H"
#include "surfaceInterpolate.H"
#include "fvcGrad.H"
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#include "fvcSnGrad.H"
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#include "fvcFlux.H"
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// * * * * * * * * * * * * * * * Static Member Data  * * * * * * * * * * * * //

const Foam::scalar Foam::multiphaseSystem::convertToRad =
    Foam::constant::mathematical::pi/180.0;


// * * * * * * * * * * * * * Private Member Functions  * * * * * * * * * * * //

void Foam::multiphaseSystem::calcAlphas()
{
    scalar level = 0.0;
    alphas_ == 0.0;

    forAllIter(PtrDictionary<phaseModel>, phases_, iter)
    {
        alphas_ += level*iter();
        level += 1.0;
    }

    alphas_.correctBoundaryConditions();
}


void Foam::multiphaseSystem::solveAlphas()
{
    PtrList<surfaceScalarField> phiAlphaCorrs(phases_.size());
    int phasei = 0;

    forAllIter(PtrDictionary<phaseModel>, phases_, iter)
    {
        phaseModel& phase1 = iter();
        volScalarField& alpha1 = phase1;
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        phase1.phiAlpha() =
            dimensionedScalar("0", dimensionSet(0, 3, -1, 0, 0), 0);

        phiAlphaCorrs.set
        (
            phasei,
            new surfaceScalarField
            (
                fvc::flux
                (
                    phi_,
                    phase1,
                    "div(phi," + alpha1.name() + ')'
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                )
            )
        );

        surfaceScalarField& phiAlphaCorr = phiAlphaCorrs[phasei];

        forAllIter(PtrDictionary<phaseModel>, phases_, iter2)
        {
            phaseModel& phase2 = iter2();
            volScalarField& alpha2 = phase2;
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            if (&phase2 == &phase1) continue;

            surfaceScalarField phir(phase1.phi() - phase2.phi());
            scalarCoeffSymmTable::const_iterator cAlpha
                cAlphas_.find(interfacePair(phase1, phase2))
            if (cAlpha != cAlphas_.end())
            {
                surfaceScalarField phic
                (
                    (mag(phi_) + mag(phase1.phi() - phase2.phi()))/mesh_.magSf()
                );

                phir += min(cAlpha()*phic, max(phic))*nHatf(phase1, phase2);
            }

            word phirScheme
            (
                "div(phir," + alpha2.name() + ',' + alpha1.name() + ')'
            );

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            phiAlphaCorr += fvc::flux
            (
                -fvc::flux(-phir, phase2, phirScheme),
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                phase1,
                phirScheme
        // Ensure that the flux at inflow BCs is preserved
        phiAlphaCorr.boundaryField() = min
        (
            phase1.phi().boundaryField()*alpha1.boundaryField(),
            phiAlphaCorr.boundaryField()
        );

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        MULES::limit
        (
            geometricOneField(),
            phase1,
            phi_,
            phiAlphaCorr,
            zeroField(),
            zeroField(),
            1,
            0,
            3,
            true
        );

        phasei++;
    }

    MULES::limitSum(phiAlphaCorrs);

    volScalarField sumAlpha
    (
        IOobject
        (
            "sumAlpha",
            mesh_.time().timeName(),
            mesh_
        ),
        mesh_,
        dimensionedScalar("sumAlpha", dimless, 0)
    );

    phasei = 0;

    forAllIter(PtrDictionary<phaseModel>, phases_, iter)
    {
        phaseModel& phase1 = iter();

        surfaceScalarField& phiAlpha = phiAlphaCorrs[phasei];
        phiAlpha += upwind<scalar>(mesh_, phi_).flux(phase1);

        MULES::explicitSolve
        (
            geometricOneField(),
            phase1,
            phiAlpha,
            zeroField(),
            zeroField()
        );

        phase1.phiAlpha() += phiAlpha;

        Info<< phase1.name() << " volume fraction, min, max = "
            << phase1.weightedAverage(mesh_.V()).value()
            << ' ' << min(phase1).value()
            << ' ' << max(phase1).value()
            << endl;

        sumAlpha += phase1;

        phasei++;
    }

    Info<< "Phase-sum volume fraction, min, max = "
        << sumAlpha.weightedAverage(mesh_.V()).value()
        << ' ' << min(sumAlpha).value()
        << ' ' << max(sumAlpha).value()
        << endl;

    calcAlphas();
}


Foam::tmp<Foam::surfaceVectorField> Foam::multiphaseSystem::nHatfv
(
    const volScalarField& alpha1,
    const volScalarField& alpha2
) const
{
    /*
    // Cell gradient of alpha
    volVectorField gradAlpha =
        alpha2*fvc::grad(alpha1) - alpha1*fvc::grad(alpha2);

    // Interpolated face-gradient of alpha
    surfaceVectorField gradAlphaf = fvc::interpolate(gradAlpha);
    */

    surfaceVectorField gradAlphaf
    (
        fvc::interpolate(alpha2)*fvc::interpolate(fvc::grad(alpha1))
      - fvc::interpolate(alpha1)*fvc::interpolate(fvc::grad(alpha2))
    );

    // Face unit interface normal
    return gradAlphaf/(mag(gradAlphaf) + deltaN_);
}


Foam::tmp<Foam::surfaceScalarField> Foam::multiphaseSystem::nHatf
(
    const volScalarField& alpha1,
    const volScalarField& alpha2
) const
{
    // Face unit interface normal flux
    return nHatfv(alpha1, alpha2) & mesh_.Sf();
}


// Correction for the boundary condition on the unit normal nHat on
// walls to produce the correct contact angle.

// The dynamic contact angle is calculated from the component of the
// velocity on the direction of the interface, parallel to the wall.

void Foam::multiphaseSystem::correctContactAngle
(
    const phaseModel& phase1,
    const phaseModel& phase2,
    surfaceVectorField::GeometricBoundaryField& nHatb
) const
{
    const volScalarField::GeometricBoundaryField& gbf
        = phase1.boundaryField();

    const fvBoundaryMesh& boundary = mesh_.boundary();

    forAll(boundary, patchi)
    {
        if (isA<alphaContactAngleFvPatchScalarField>(gbf[patchi]))
        {
            const alphaContactAngleFvPatchScalarField& acap =
                refCast<const alphaContactAngleFvPatchScalarField>(gbf[patchi]);

            vectorField& nHatPatch = nHatb[patchi];

            vectorField AfHatPatch
            (
                mesh_.Sf().boundaryField()[patchi]
               /mesh_.magSf().boundaryField()[patchi]
            );

            alphaContactAngleFvPatchScalarField::thetaPropsTable::
                const_iterator tp =
                acap.thetaProps().find(interfacePair(phase1, phase2));

            if (tp == acap.thetaProps().end())
            {
                FatalErrorIn
                (
                    "multiphaseSystem::correctContactAngle"
                    "(const phaseModel& phase1, const phaseModel& phase2, "
                    "fvPatchVectorFieldField& nHatb) const"
                )   << "Cannot find interface " << interfacePair(phase1, phase2)
                    << "\n    in table of theta properties for patch "
                    << acap.patch().name()
                    << exit(FatalError);
            }

            bool matched = (tp.key().first() == phase1.name());

            scalar theta0 = convertToRad*tp().theta0(matched);
            scalarField theta(boundary[patchi].size(), theta0);

            scalar uTheta = tp().uTheta();

            // Calculate the dynamic contact angle if required
            if (uTheta > SMALL)
            {
                scalar thetaA = convertToRad*tp().thetaA(matched);
                scalar thetaR = convertToRad*tp().thetaR(matched);

                // Calculated the component of the velocity parallel to the wall
                vectorField Uwall
                (
                    phase1.U().boundaryField()[patchi].patchInternalField()
                  - phase1.U().boundaryField()[patchi]
                );
                Uwall -= (AfHatPatch & Uwall)*AfHatPatch;

                // Find the direction of the interface parallel to the wall
                vectorField nWall
                (
                    nHatPatch - (AfHatPatch & nHatPatch)*AfHatPatch
                );

                // Normalise nWall
                nWall /= (mag(nWall) + SMALL);

                // Calculate Uwall resolved normal to the interface parallel to
                // the interface
                scalarField uwall(nWall & Uwall);

                theta += (thetaA - thetaR)*tanh(uwall/uTheta);
            }


            // Reset nHatPatch to correspond to the contact angle

            scalarField a12(nHatPatch & AfHatPatch);

            scalarField b1(cos(theta));

            scalarField b2(nHatPatch.size());

            forAll(b2, facei)
            {
                b2[facei] = cos(acos(a12[facei]) - theta[facei]);
            }

            scalarField det(1.0 - a12*a12);

            scalarField a((b1 - a12*b2)/det);
            scalarField b((b2 - a12*b1)/det);

            nHatPatch = a*AfHatPatch + b*nHatPatch;

            nHatPatch /= (mag(nHatPatch) + deltaN_.value());
        }
    }
}


Foam::tmp<Foam::volScalarField> Foam::multiphaseSystem::K
(
    const phaseModel& phase1,
    const phaseModel& phase2
) const
{
    tmp<surfaceVectorField> tnHatfv = nHatfv(phase1, phase2);

    correctContactAngle(phase1, phase2, tnHatfv().boundaryField());

    // Simple expression for curvature
    return -fvc::div(tnHatfv & mesh_.Sf());
}


// * * * * * * * * * * * * * * * * Constructors  * * * * * * * * * * * * * * //

Foam::multiphaseSystem::multiphaseSystem
(
    const volVectorField& U,
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    const surfaceScalarField& phi
)
:
    IOdictionary
    (
        IOobject
        (
            "transportProperties",
            U.time().constant(),
            U.db(),
            IOobject::MUST_READ_IF_MODIFIED,
            IOobject::NO_WRITE
        )
    ),

    phases_(lookup("phases"), phaseModel::iNew(U.mesh())),
    mesh_(U.mesh()),
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    phi_(phi),

    alphas_
    (
        IOobject
        (
            "alphas",
            mesh_.time().timeName(),
            mesh_,
            IOobject::NO_READ,
            IOobject::AUTO_WRITE
        ),
        mesh_,
        dimensionedScalar("alphas", dimless, 0.0),
        zeroGradientFvPatchScalarField::typeName
    ),

    sigmas_(lookup("sigmas")),
    dimSigma_(1, 0, -2, 0, 0),
    cAlphas_(lookup("interfaceCompression")),
    Cvms_(lookup("virtualMass")),
    deltaN_
    (
        "deltaN",
        1e-8/pow(average(mesh_.V()), 1.0/3.0)
    )
{
    calcAlphas();
    alphas_.write();

    interfaceDictTable dragModelsDict(lookup("drag"));

    forAllConstIter(interfaceDictTable, dragModelsDict, iter)
    {
        dragModels_.insert
        (
            iter.key(),
            dragModel::New
            (
                iter(),
                *phases_.lookup(iter.key().first()),
                *phases_.lookup(iter.key().second())
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            ).ptr()
        );
    }

    forAllConstIter(PtrDictionary<phaseModel>, phases_, iter1)
    {
        const phaseModel& phase1 = iter1();

        forAllConstIter(PtrDictionary<phaseModel>, phases_, iter2)
        {
            const phaseModel& phase2 = iter2();

            if (&phase2 != &phase1)
            {
                scalarCoeffSymmTable::const_iterator sigma
                (
                    sigmas_.find(interfacePair(phase1, phase2))
                );

                if (sigma != sigmas_.end())
                {
                    scalarCoeffSymmTable::const_iterator cAlpha
                    (
                        cAlphas_.find(interfacePair(phase1, phase2))
                    );

                    if (cAlpha == cAlphas_.end())
                    {
                        WarningIn
                        (
                            "multiphaseSystem::multiphaseSystem"
                            "(const volVectorField& U,"
                            "const surfaceScalarField& phi)"
                        ) << "Compression coefficient not specified for "
                             "phase pair ("
                          << phase1.name() << ' ' << phase2.name()
                          << ") for which a surface tension "
                             "coefficient is specified"
                          << endl;
                    }
                }
            }
        }
    }
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}


// * * * * * * * * * * * * * * Member Functions  * * * * * * * * * * * * * * //

Foam::tmp<Foam::volScalarField> Foam::multiphaseSystem::rho() const
{
    PtrDictionary<phaseModel>::const_iterator iter = phases_.begin();

    tmp<volScalarField> trho = iter()*iter().rho();

    for (++iter; iter != phases_.end(); ++iter)
    {
        trho() += iter()*iter().rho();
    }

    return trho;
}


Foam::tmp<Foam::scalarField>
Foam::multiphaseSystem::rho(const label patchi) const
{
    PtrDictionary<phaseModel>::const_iterator iter = phases_.begin();

    tmp<scalarField> trho = iter().boundaryField()[patchi]*iter().rho().value();

    for (++iter; iter != phases_.end(); ++iter)
    {
        trho() += iter().boundaryField()[patchi]*iter().rho().value();
    }

    return trho;
}


Foam::tmp<Foam::volScalarField> Foam::multiphaseSystem::nu() const
{
    PtrDictionary<phaseModel>::const_iterator iter = phases_.begin();

    tmp<volScalarField> tmu = iter()*(iter().rho()*iter().nu());

    for (++iter; iter != phases_.end(); ++iter)
    {
        tmu() += iter()*(iter().rho()*iter().nu());
    }

    return tmu/rho();
}


Foam::tmp<Foam::scalarField>
Foam::multiphaseSystem::nu(const label patchi) const
{
    PtrDictionary<phaseModel>::const_iterator iter = phases_.begin();

    tmp<scalarField> tmu =
        iter().boundaryField()[patchi]
       *(iter().rho().value()*iter().nu().value());

    for (++iter; iter != phases_.end(); ++iter)
    {
        tmu() +=
            iter().boundaryField()[patchi]
           *(iter().rho().value()*iter().nu().value());
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Foam::tmp<Foam::volScalarField> Foam::multiphaseSystem::Cvm
(
    const phaseModel& phase
) const
{
    tmp<volScalarField> tCvm
    (
        new volScalarField
        (
            IOobject
            (
                "Cvm",
                mesh_.time().timeName(),
                mesh_
            ),
            mesh_,
            dimensionedScalar
            (
                "Cvm",
                dimensionSet(1, -3, 0, 0, 0),
                0
            )
        )
    );

    forAllConstIter(PtrDictionary<phaseModel>, phases_, iter)
    {
        const phaseModel& phase2 = iter();

        if (&phase2 != &phase)
        {
            scalarCoeffTable::const_iterator Cvm
            (
                Cvms_.find(interfacePair(phase, phase2))
            );

            if (Cvm != Cvms_.end())
            {
                tCvm() += Cvm()*phase2.rho()*phase2;
            }
            else
            {
                Cvm = Cvms_.find(interfacePair(phase2, phase));

                if (Cvm != Cvms_.end())
                {
                    tCvm() += Cvm()*phase.rho()*phase2;
                }
            }
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        }
    }

    return tCvm;
}


Foam::tmp<Foam::volVectorField> Foam::multiphaseSystem::Svm
(
    const phaseModel& phase
) const
{
    tmp<volVectorField> tSvm
    (
        new volVectorField
        (
            IOobject
            (
                "Svm",
                mesh_.time().timeName(),
                mesh_
            ),
            mesh_,
            dimensionedVector
            (
                "Svm",
                dimensionSet(1, -2, -2, 0, 0),
                vector::zero
            )
        )
    );

    forAllConstIter(PtrDictionary<phaseModel>, phases_, iter)
    {
        const phaseModel& phase2 = iter();

        if (&phase2 != &phase)
        {
            scalarCoeffTable::const_iterator Cvm
            (
                Cvms_.find(interfacePair(phase, phase2))
            );

            if (Cvm != Cvms_.end())
            {
                tSvm() += Cvm()*phase2.rho()*phase2*phase2.DDtU();
            }
            else
            {
                Cvm = Cvms_.find(interfacePair(phase2, phase));

                if (Cvm != Cvms_.end())
                {
                    tSvm() += Cvm()*phase.rho()*phase2*phase2.DDtU();
                }
            }
    // Remove virtual mass at fixed-flux boundaries
    forAll(phase.phi().boundaryField(), patchi)
    {
        if
        (
            isA<fixedValueFvsPatchScalarField>
            (
                phase.phi().boundaryField()[patchi]
            )
        )
        {
            tSvm().boundaryField()[patchi] = vector::zero;
        }
    }

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    return tSvm;
}


Foam::autoPtr<Foam::multiphaseSystem::dragCoeffFields>
Foam::multiphaseSystem::dragCoeffs() const
{
    autoPtr<dragCoeffFields> dragCoeffsPtr(new dragCoeffFields);

    forAllConstIter(dragModelTable, dragModels_, iter)
    {
        const dragModel& dm = *iter();

                    //fvc::average(dm.phase1()*dm.phase2()),
                    //fvc::average(dm.phase1())*fvc::average(dm.phase2()),
                    dm.phase1()*dm.phase2(),
                    dm.residualPhaseFraction()
                )
               *dm.K
                (
                    max
                    (
                        mag(dm.phase1().U() - dm.phase2().U()),
                        dm.residualSlip()
                    )
                )
            ).ptr();

        // Remove drag at fixed-flux boundaries
        forAll(dm.phase1().phi().boundaryField(), patchi)
        {
            if
            (
                isA<fixedValueFvsPatchScalarField>
                (
                    dm.phase1().phi().boundaryField()[patchi]
                )
            )
            {
                Kptr->boundaryField()[patchi] = 0.0;
            }
        }

        dragCoeffsPtr().insert(iter.key(), Kptr);
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    }

    return dragCoeffsPtr;
}


Foam::tmp<Foam::volScalarField> Foam::multiphaseSystem::dragCoeff
(
    const phaseModel& phase,
    const dragCoeffFields& dragCoeffs
) const
{
    tmp<volScalarField> tdragCoeff
    (
        new volScalarField
        (
            IOobject
            (
                "dragCoeff",
                mesh_.time().timeName(),
                mesh_
            ),
            mesh_,
            dimensionedScalar
            (
                "dragCoeff",
                dimensionSet(1, -3, -1, 0, 0),
                0
            )
        )
    );

    dragModelTable::const_iterator dmIter = dragModels_.begin();
    dragCoeffFields::const_iterator dcIter = dragCoeffs.begin();
    for
    (
        ;
        dmIter != dragModels_.end() && dcIter != dragCoeffs.end();
        ++dmIter, ++dcIter
    )
    {
        if
        (
            &phase == &dmIter()->phase1()
         || &phase == &dmIter()->phase2()
        )
        {
            tdragCoeff() += *dcIter();
        }
    }

    return tdragCoeff;
}


Foam::tmp<Foam::surfaceScalarField> Foam::multiphaseSystem::surfaceTension
(
    const phaseModel& phase1
) const
    tmp<surfaceScalarField> tSurfaceTension
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    (
        new surfaceScalarField
        (
            IOobject
            (
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                mesh_.time().timeName(),
                mesh_
            ),
            mesh_,
            dimensionedScalar
            (
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                dimensionSet(1, -2, -2, 0, 0),
    forAllConstIter(PtrDictionary<phaseModel>, phases_, iter)
        const phaseModel& phase2 = iter();
        if (&phase2 != &phase1)
            scalarCoeffSymmTable::const_iterator sigma
            (
                sigmas_.find(interfacePair(phase1, phase2))
            );
            if (sigma != sigmas_.end())
            {
                tSurfaceTension() +=
                    dimensionedScalar("sigma", dimSigma_, sigma())
                   *fvc::interpolate(K(phase1, phase2))*
                    (
                        fvc::interpolate(phase2)*fvc::snGrad(phase1)
                      - fvc::interpolate(phase1)*fvc::snGrad(phase2)
                    );
            }
    return tSurfaceTension;
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}


Foam::tmp<Foam::volScalarField>
Foam::multiphaseSystem::nearInterface() const
{
    tmp<volScalarField> tnearInt
    (
        new volScalarField
        (
            IOobject
            (
                "nearInterface",
                mesh_.time().timeName(),
                mesh_
            ),
            mesh_,
            dimensionedScalar("nearInterface", dimless, 0.0)
        )
    );

    forAllConstIter(PtrDictionary<phaseModel>, phases_, iter)
    {
        tnearInt() = max(tnearInt(), pos(iter() - 0.01)*pos(0.99 - iter()));
    }

    return tnearInt;
}


void Foam::multiphaseSystem::solve()
{
    forAllIter(PtrDictionary<phaseModel>, phases_, iter)
    {
        iter().correct();
    }

    const Time& runTime = mesh_.time();

    const dictionary& alphaControls = mesh_.solverDict("alpha");
    label nAlphaSubCycles(readLabel(alphaControls.lookup("nAlphaSubCycles")));
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    if (nAlphaSubCycles > 1)
    {
        dimensionedScalar totalDeltaT = runTime.deltaT();

        PtrList<volScalarField> alpha0s(phases_.size());
        PtrList<surfaceScalarField> phiSums(phases_.size());

        int phasei = 0;
        forAllIter(PtrDictionary<phaseModel>, phases_, iter)
        {
            phaseModel& phase = iter();
            volScalarField& alpha = phase;

            alpha0s.set
            (
                phasei,
                new volScalarField(alpha.oldTime())
            );

            phiSums.set
            (
                phasei,
                new surfaceScalarField
                (
                    IOobject
                    (
                        "phiSum" + alpha.name(),
                        runTime.timeName(),
                        mesh_
                    ),
                    mesh_,
                    dimensionedScalar("0", dimensionSet(0, 3, -1, 0, 0), 0)
                )
            );

            phasei++;
        }

            subCycleTime alphaSubCycle
            (
                const_cast<Time&>(runTime),
                nAlphaSubCycles
            );
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            !(++alphaSubCycle).end();
        )
        {
            solveAlphas();

            int phasei = 0;
            forAllIter(PtrDictionary<phaseModel>, phases_, iter)
            {
                phiSums[phasei] += (runTime.deltaT()/totalDeltaT)*iter().phi();
                phasei++;
            }
        }

        phasei = 0;
        forAllIter(PtrDictionary<phaseModel>, phases_, iter)
        {
            phaseModel& phase = iter();
            volScalarField& alpha = phase;

            phase.phi() = phiSums[phasei];

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            // Correct the time index of the field
            // to correspond to the global time
            alpha.timeIndex() = runTime.timeIndex();

            // Reset the old-time field value
            alpha.oldTime() = alpha0s[phasei];
            alpha.oldTime().timeIndex() = runTime.timeIndex();

            phasei++;
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        }
    }
    else
    {
        solveAlphas();
    }
}


bool Foam::multiphaseSystem::read()
{
    if (regIOobject::read())
    {
        bool readOK = true;

        PtrList<entry> phaseData(lookup("phases"));
        label phasei = 0;

        forAllIter(PtrDictionary<phaseModel>, phases_, iter)
        {
            readOK &= iter().read(phaseData[phasei++].dict());
        }

        lookup("sigmas") >> sigmas_;
        lookup("interfaceCompression") >> cAlphas_;
        lookup("virtualMass") >> Cvms_;

        return readOK;
    }
    else
    {
        return false;
    }
}


// ************************************************************************* //