Updated with new run, test and clean scripts

tutorials/Allclean

+#!/bin/sh
+#------------------------------------------------------------------------------
+# =========                 |
+# \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
+#  \\    /   O peration     |
+#   \\  /    A nd           | Copyright (C) 1991-2007 OpenCFD Ltd.
+#    \\/     M anipulation  |
+#------------------------------------------------------------------------------
+# License
+#     This file is part of OpenFOAM.
+#
+#     OpenFOAM is free software; you can redistribute it and/or modify it
+#     under the terms of the GNU General Public License as published by the
+#     Free Software Foundation; either version 2 of the License, or (at your
+#     option) any later version.
+#
+#     OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
+#     ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+#     FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
+#     for more details.
+#
+#     You should have received a copy of the GNU General Public License
+#     along with OpenFOAM; if not, write to the Free Software Foundation,
+#     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+#
+# Script
+#     Allclean
+#
+# Description
+#
+#------------------------------------------------------------------------------
+
+echo "Cleaning backup files"
+find . -type f \( -name "*~" -o -name "*.bak" \) -exec rm {} \;
+find . \( -name 'core' -o -name 'core.[1-9]*' \) -exec rm {} \;
+find . \( -name '*.pvs' -o -name '*.foam' \) -exec rm {} \;
+rm logs > /dev/null 2>&1
+rm testLoopReport > /dev/null 2>&1
+
+echo ""
+
+foamCleanTutorials cases
+
+# ----------------------------------------------------------------- end-of-file

tutorials/Allrun

+#!/bin/sh
+#------------------------------------------------------------------------------
+# =========                 |
+# \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
+#  \\    /   O peration     |
+#   \\  /    A nd           | Copyright (C) 1991-2007 OpenCFD Ltd.
+#    \\/     M anipulation  |
+#------------------------------------------------------------------------------
+# License
+#     This file is part of OpenFOAM.
+#
+#     OpenFOAM is free software; you can redistribute it and/or modify it
+#     under the terms of the GNU General Public License as published by the
+#     Free Software Foundation; either version 2 of the License, or (at your
+#     option) any later version.
+#
+#     OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
+#     ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+#     FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
+#     for more details.
+#
+#     You should have received a copy of the GNU General Public License
+#     along with OpenFOAM; if not, write to the Free Software Foundation,
+#     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+#
+# Script
+#     Allrun
+#
+# Description
+#
+#------------------------------------------------------------------------------
+
+# Source tutorial run functions
+. $WM_PROJECT_DIR/bin/tools/RunFunctions
+
+# logReport <logfile>
+# Extracts useful info from log file.
+logReport () {
+    case=`dirname $1 | sed s/"\(.*\)\.\/"/""/g`
+    app=`echo $1 | sed s/"\(.*\)\."/""/g`
+    appAndCase="Application $app - case $case"
+
+    fatalError=`grep "FOAM FATAL" $1`
+    UxSS=`grep -E "Ux[:| ]*solution singularity" $1`
+    UySS=`grep -E "Uy[:| ]*solution singularity" $1`
+    UzSS=`grep -E "Uz[:| ]*solution singularity" $1`
+    completed=`grep -E "^[\t ]*[eE]nd" $1`
+
+    if [ "$fatalError" ] ; then
+        echo "$appAndCase: ** FOAM FATAL ERROR **"
+        return
+    elif [ "$UxSS" -a "$UySS" -a "$UzSS" ] ; then
+        echo "$appAndCase: ** Solution singularity **"
+        return
+    elif [ "$completed" ] ; then
+        completionTime=`tail -10 $log | grep Execution | cut -d= -f2 | sed 's/^[ \t]*//'`
+        if [ "$completionTime" ] ; then
+            completionTime="in $completionTime"
+        fi
+        echo "$appAndCase: completed $completionTime"
+        return
+    else
+        echo "$appAndCase: unconfirmed completion"
+    fi
+}
+
+
+# Recursively run all tutorials
+foamRunTutorials cases
+
+
+# Analyse all log files
+rm testLoopReport > /dev/null 2>&1 &
+touch testLoopReport
+for application in *
+do
+    if [ -d $application ]
+    then
+        cd $application
+        for log in `find . -name "log.*" | xargs ls -rt`
+        do
+            logReport $log >> ../testLoopReport
+        done
+        echo "" >> ../testLoopReport
+        cd ..
+    fi
+done
+
+find . -name "log.*" -exec cat {} \; >> logs
+
+
+# ----------------------------------------------------------------- end-of-file

tutorials/Alltest

+#!/bin/sh
+#------------------------------------------------------------------------------
+# =========                 |
+# \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
+#  \\    /   O peration     |
+#   \\  /    A nd           | Copyright (C) 1991-2007 OpenCFD Ltd.
+#    \\/     M anipulation  |
+#------------------------------------------------------------------------------
+# License
+#     This file is part of OpenFOAM.
+#
+#     OpenFOAM is free software; you can redistribute it and/or modify it
+#     under the terms of the GNU General Public License as published by the
+#     Free Software Foundation; either version 2 of the License, or (at your
+#     option) any later version.
+#
+#     OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
+#     ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+#     FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
+#     for more details.
+#
+#     You should have received a copy of the GNU General Public License
+#     along with OpenFOAM; if not, write to the Free Software Foundation,
+#     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+#
+# Script
+#     Alltest
+#
+# Description
+#
+#------------------------------------------------------------------------------
+
+# FUNCTIONS
+#
+printUsage () {
+cat <<EOF
+Usage: $0
+Quickly tests the tutorials and writes out the scheme/solver information
+
+Options are:
+-d         sets up a default scheme on all schemes
+-h         help
+EOF
+}
+
+setDefaultFvSchemes () {
+cat<<EOF
+gradSchemes { default Gauss linear; }
+divSchemes
+{
+    default Gauss linear;
+    div(phi,fu_ft_h) Gauss multivariateSelection
+    {
+        fu upwind;
+        ft upwind;
+        h  upwind;
+    };
+    div(phi,ft_b_h_hu) Gauss multivariateSelection
+    {
+        fu upwind;
+        ft upwind;
+        b  upwind;
+        h  upwind;
+        hu upwind;
+    };
+}
+laplacianSchemes { default Gauss linear corrected; }
+interpolationSchemes { default linear; }
+snGradSchemes { default corrected; }
+fluxRequired { default yes; }
+EOF
+}
+#
+# VARIABLE
+#
+MAIN_CONTROL_DICT=
+
+for i in \
+  $HOME/.$WM_PROJECT-$WM_PROJECT_VERSION \
+  $HOME/.$WM_PROJECT/$WM_PROJECT_VERSION \
+  $HOME/.$WM_PROJECT \
+  $WM_PROJECT_DIR/etc \
+  ;
+do
+  if [ -f "$i/controlDict" ]; then
+     MAIN_CONTROL_DICT="$i/controlDict"
+     break
+  fi
+done
+TUTORIALS_DIR=.
+TEST_RUN_DIR=../tutorialsTest
+FV_SCHEMES=\
+" \
+    gradScheme \
+    divScheme \
+    laplacianScheme \
+    interpolationScheme \
+    snGradScheme \
+    fluxRequired \
+"
+SCHEMES_FILE="FvSchemes"
+SCHEMES_TEMP="FvSchemes.temp"
+SOLVERS_FILE="FvSolution"
+SOLVERS_TEMP="FvSolution.temp"
+DEFAULT_SCHEMES=0
+
+#
+# OPTIONS
+#
+OPTS=`getopt hd $*`
+if [ $? -ne 0 ] ; then
+    echo "Aborting due to invalid option"
+    printUsage
+    exit 1
+fi
+eval set -- "$OPTS"
+while [ $1 != -- ]; do
+    case $1 in
+        -d) DEFAULT_SCHEMES=1;;
+        -h) printUsage; exit 1;;
+    esac
+    shift
+done
+shift
+
+#
+# MAIN
+#
+
+if [ -d "$TEST_RUN_DIR" ] ; then
+    rm -rf $TEST_RUN_DIR
+fi
+
+echo "Modifying ${MAIN_CONTROL_DICT}"
+if [ -e ${MAIN_CONTROL_DICT}.org ]
+then
+    echo "File " ${MAIN_CONTROL_DICT}.org " already exists"
+    echo "Did Alltest fail in some way and then run again?"
+    exit 1
+fi
+
+# Clean up on termination and on Ctrl-C
+trap 'mv ${MAIN_CONTROL_DICT}.org ${MAIN_CONTROL_DICT} 2>/dev/null; exit 0' \
+    EXIT TERM INT
+cp ${MAIN_CONTROL_DICT} ${MAIN_CONTROL_DICT}.org
+
+sed \
+-e s/"\(fvSchemes[ \t]*\)\([0-9]\);"/"\1 1;"/g \
+-e s/"\(fvSolution[ \t]*\)\([0-9]\);"/"\1 1;"/g \
+${MAIN_CONTROL_DICT}.org > ${MAIN_CONTROL_DICT}
+
+echo "Copying the tutorials"
+cp -a ${TUTORIALS_DIR} ${TEST_RUN_DIR}
+
+echo "Modifying the controlDicts to run only one time step"
+cd ${TEST_RUN_DIR}
+
+for CD in `find . -name "controlDict*"`
+do
+    mv ${CD} ${CD}.org
+    sed \
+   -e s/"\(startFrom[ \t]*\)\([a-zA-Z]*\);"/"\1 latestTime;"/g \
+    -e s/"\(stopAt[ \t]*\)\([a-zA-Z]*\);"/"\1 nextWrite;"/g \
+    -e s/"\(writeControl[ \t]*\)\([a-zA-Z]*\);"/"\1 timeStep;"/g \
+    -e s/"\(writeInterval[ \t]*\)\([0-9a-zA-Z.-]*\);"/"\1 1;"/g \
+    ${CD}.org > ${CD}
+done
+
+if [ $DEFAULT_SCHEMES = 1 ] ; then
+    echo "Modifying the fvSchemes to contain only default schemes"
+    for FV_SC in `find . -name fvSchemes`
+    do
+        for S in $FV_SCHEMES
+        do
+            mv ${FV_SC} ${FV_SC}.org
+            sed -e /"${S}"/,/$p/d ${FV_SC}.org > ${FV_SC}
+        done
+        setDefaultFvSchemes >> ${FV_SC}
+    done
+fi
+
+./Allrun
+
+sed -e :a -e '/\\$/N; s/\\\n//; ta' Allrun > temp
+APPLICATIONS=\
+    `grep "applications=" temp | sed 's/applications=\"\([A-Za-z \t]*\)\"/\1/g'`
+
+rm $SCHEMES_FILE > /dev/null 2>&1
+for APP in $APPLICATIONS
+do
+    echo $APP >> $SCHEMES_FILE
+    echo "$APP: " | tr -d "\n" >> $SOLVERS_FILE
+    for ST in $FV_SCHEMES
+    do
+        rm $SCHEMES_TEMP > /dev/null 2>&1
+        rm $SOLVERS_TEMP > /dev/null 2>&1
+        echo "  ${ST}" >> $SCHEMES_FILE
+        for LOG in `find ${APP} -name "log.${APP}"`
+        do
+            for S in `grep ${ST} ${LOG} | cut -d" " -f4`
+            do
+                echo "    ${S}" >> $SCHEMES_TEMP
+            done
+        echo `grep solver ${LOG} | cut -d" " -f4` >> $SOLVERS_TEMP
+        done
+        if [ -f $SCHEMES_TEMP ] ; then
+            cat $SCHEMES_TEMP | sort -u >> $SCHEMES_FILE
+        fi
+    done
+    cat $SOLVERS_TEMP | tr " " "\n" | sort -u | tr "\n" " " >> $SOLVERS_FILE
+    echo "" >> $SOLVERS_FILE
+done
+
+
+# ----------------------------------------------------------------- end-of-file

tutorials/MRFSimpleFoam/MRFSimpleFoam/MRFSimpleFoam.C

+/*---------------------------------------------------------------------------*\
+  =========                 |
+  \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
+   \\    /   O peration     |
+    \\  /    A nd           | Copyright (C) 1991-2007 OpenCFD Ltd.
+     \\/     M anipulation  |
+-------------------------------------------------------------------------------
+License
+    This file is part of OpenFOAM.
+
+    OpenFOAM is free software; you can redistribute it and/or modify it
+    under the terms of the GNU General Public License as published by the
+    Free Software Foundation; either version 2 of the License, or (at your
+    option) any later version.
+
+    OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
+    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+    FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
+    for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with OpenFOAM; if not, write to the Free Software Foundation,
+    Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+
+Application
+    MRFSimpleFoam
+
+Description
+    Steady-state solver for incompressible, turbulent flow of non-Newtonian 
+    fluids with MRF regions.
+
+\*---------------------------------------------------------------------------*/
+
+#include "fvCFD.H"
+#include "incompressible/singlePhaseTransportModel/singlePhaseTransportModel.H"
+#include "incompressible/turbulenceModel/turbulenceModel.H"
+#include "MRFZones.H"
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+int main(int argc, char *argv[])
+{
+
+#   include "setRootCase.H"
+
+#   include "createTime.H"
+#   include "createMesh.H"
+#   include "createFields.H"
+#   include "initContinuityErrs.H"
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+    Info<< "\nStarting time loop\n" << endl;
+
+    for (runTime++; !runTime.end(); runTime++)
+    {
+        Info<< "Time = " << runTime.timeName() << nl << endl;
+
+#       include "readSIMPLEControls.H"
+
+        p.storePrevIter();
+
+        // Pressure-velocity SIMPLE corrector
+        {
+            // Momentum predictor
+
+            tmp<fvVectorMatrix> UEqn
+            (
+                fvm::div(phi, U)
+              + turbulence->divDevReff(U)
+            );
+            mrfZones.addCoriolis(UEqn());
+
+            UEqn().relax();
+
+            solve(UEqn() == -fvc::grad(p));
+
+            p.boundaryField().updateCoeffs();
+            volScalarField rAU = 1.0/UEqn().A();
+            U = rAU*UEqn().H();
+            UEqn.clear();
+
+            phi = fvc::interpolate(U, "interpolate(HbyA)") & mesh.Sf();
+            mrfZones.relativeFlux(phi);
+            adjustPhi(phi, U, p);
+
+            // Non-orthogonal pressure corrector loop
+            for (int nonOrth=0; nonOrth<=nNonOrthCorr; nonOrth++)
+            {
+                fvScalarMatrix pEqn
+                (
+                    fvm::laplacian(rAU, p) == fvc::div(phi)
+                );
+
+                pEqn.setReference(pRefCell, pRefValue);
+                pEqn.solve();
+
+                if (nonOrth == nNonOrthCorr)
+                {
+                    phi -= pEqn.flux();
+                }
+            }
+
+#           include "continuityErrs.H"
+
+            // Explicitly relax pressure for momentum corrector
+            p.relax();
+
+            // Momentum corrector
+            U -= rAU*fvc::grad(p);
+            U.correctBoundaryConditions();
+        }
+
+        turbulence->correct();
+
+        runTime.write();
+
+        Info<< "ExecutionTime = " << runTime.elapsedCpuTime() << " s"
+            << "  ClockTime = " << runTime.elapsedClockTime() << " s"
+            << nl << endl;
+    }
+
+    Info<< "End\n" << endl;
+
+    return(0);
+}
+
+
+// ************************************************************************* //

tutorials/MRFSimpleFoam/MRFSimpleFoam/Make/files

+MRFSimpleFoam.C
+
+EXE = $(FOAM_USER_APPBIN)/MRFSimpleFoam

tutorials/MRFSimpleFoam/MRFSimpleFoam/Make/options

+EXE_INC = \
+    -I$(LIB_SRC)/finiteVolume/lnInclude \
+    -I$(LIB_SRC)/turbulenceModels \
+    -I$(LIB_SRC)/transportModels
+
+EXE_LIBS = \
+    -lincompressibleTurbulenceModels \
+    -lincompressibleTransportModels \
+    -lfiniteVolume

tutorials/MRFSimpleFoam/MRFSimpleFoam/createFields.H

+    Info << "Reading field p\n" << endl;
+    volScalarField p
+    (
+        IOobject
+        (
+            "p",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info << "Reading field U\n" << endl;
+    volVectorField U
+    (
+        IOobject
+        (
+            "U",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+#   include "createPhi.H"
+
+
+    label pRefCell = 0;
+    scalar pRefValue = 0.0;
+    setRefCell(p, mesh.solutionDict().subDict("SIMPLE"), pRefCell, pRefValue);
+
+
+    singlePhaseTransportModel laminarTransport(U, phi);
+
+    autoPtr<turbulenceModel> turbulence
+    (
+        turbulenceModel::New(U, phi, laminarTransport)
+    );
+
+
+    MRFZones mrfZones(mesh);
+    mrfZones.correctBoundaryVelocity(U);

tutorials/MRFSimpleFoam/mixerVessel2D/0/U

+/*---------------------------------------------------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
+|  \\    /   O peration     | Version:  1.4                                   |
+|   \\  /    A nd           | Web:      http://www.openfoam.org               |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+
+    root            "";
+    case            "";
+    instance        "";
+    local           "";
+
+    class           volVectorField;
+    object          U;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+dimensions      [0 1 -1 0 0 0 0];
+
+internalField   uniform (0 0 0);
+
+boundaryField
+{
+    rotor
+    {
+        type            fixedValue;
+        value           uniform (0 0 0);
+    }
+
+    stator
+    {
+        type            fixedValue;
+        value           uniform (0 0 0);
+    }
+
+    front
+    {
+        type            empty;
+    }
+
+    back
+    {
+        type            empty;
+    }
+}
+
+
+// ************************************************************************* //

tutorials/MRFSimpleFoam/mixerVessel2D/0/epsilon

+/*---------------------------------------------------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
+|  \\    /   O peration     | Version:  1.4                                   |
+|   \\  /    A nd           | Web:      http://www.openfoam.org               |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+
+    root            "";
+    case            "";
+    instance        "";
+    local           "";
+
+    class           volScalarField;
+    object          epsilon;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+