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Commit 4a2a23a7 authored by henry's avatar henry
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Lots of changes from Mark and my changes to ddtPhiCorr all mixed together 

because I failed to work out how to merge Mark's stuff -- HELP!!!
parent a016fa31
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applications/Allwmake
View file @ 4a2a23a7
#!/bin/sh
set -x
(cd solvers ; wmake all)
(cd utilities ; wmake all)
( cd solvers && wmake all )
( cd utilities && wmake all )
applications/solvers/incompressible/icoDyMFoam/icoDyMFoam.C
View file @ 4a2a23a7
......@@ -56,32 +56,35 @@ int main(int argc, char *argv[])
{
# include "readControls.H"
# include "CourantNo.H"
p.storePrevIter();
// Make the fluxes absolute
fvc::makeAbsolute(phi, U);
# include "setDeltaT.H"
runTime++;
Info<< "Time = " << runTime.timeName() << nl << endl;
bool meshChanged = mesh.update();
// Make the fluxes absolute
if (mesh.changing())
{
phi = fvc::interpolate(U) & mesh.Sf();
}
mesh.update();
if (correctPhi && meshChanged)
if (mesh.changing() && correctPhi)
{
# include "correctPhi.H"
}
// Keep the absolute fluxes for use in ddtPhiCorr
surfaceScalarField phiAbs("phiAbs", phi);
surfaceScalarField phiAbs0("phiAbs0", phi);
// Make the fluxes relative to the mesh motion
fvc::makeRelative(phi, U);
if (mesh.changing())
{
fvc::makeRelative(phi, U);
}
if (meshChanged && checkMeshCourantNo)
if (mesh.changing() && checkMeshCourantNo)
{
# include "meshCourantNo.H"
}
......@@ -89,6 +92,8 @@ int main(int argc, char *argv[])
// --- PIMPLE loop
for (int ocorr=0; ocorr<nOuterCorr; ocorr++)
{
p.storePrevIter();
# include "UEqn.H"
// --- PISO loop
......@@ -101,10 +106,50 @@ int main(int argc, char *argv[])
if (ddtPhiCorr)
{
phi += fvc::ddtPhiCorr(rAU, U, phiAbs);
if (mesh.changing())
{
dimensionedScalar rDeltaT = 1.0/mesh.time().deltaT();
volScalarField V0byV
(
IOobject
(
"V0byV",
mesh.time().timeName(),
mesh
),
mesh,
dimensionedScalar("V0byV", dimless, 1),
zeroGradientFvPatchScalarField::typeName
);
V0byV.dimensionedInternalField() = mesh.V0()/mesh.V();
V0byV.correctBoundaryConditions();
phi += rDeltaT*
(
fvc::interpolate(rAU*V0byV)*phiAbs0
- (fvc::interpolate(rAU*V0byV*U.oldTime()) & mesh.Sf())
);
}
else
{
phi += fvc::ddtPhiCorr(rAU, U, phiAbs0);
}
}
adjustPhi(phi, U, p);
if (p.needReference())
{
if (mesh.changing())
{
fvc::makeRelative(phi, U);
adjustPhi(phi, U, p);
fvc::makeAbsolute(phi, U);
}
else
{
adjustPhi(phi, U, p);
}
}
for (int nonOrth=0; nonOrth<=nNonOrthCorr; nonOrth++)
{
......@@ -138,11 +183,11 @@ int main(int argc, char *argv[])
p.relax();
}
// Make the fluxes relative to the mesh motion
fvc::makeRelative(phi, U);
U -= rAU*fvc::grad(p);
U.correctBoundaryConditions();
// Make the fluxes relative to the mesh motion
fvc::makeRelative(phi, U);
}
}
......
applications/solvers/multiphase/interDyMFoam/interDyMFoam.C
View file @ 4a2a23a7
......@@ -41,6 +41,7 @@ Description
#include "twoPhaseMixture.H"
#include "incompressible/turbulenceModel/turbulenceModel.H"
#include "probes.H"
#include "EulerDdtScheme.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
......@@ -66,7 +67,6 @@ int main(int argc, char *argv[])
{
#include "readControls.H"
#include "CourantNo.H"
#include "setDeltaT.H"
runTime++;
......@@ -76,7 +76,7 @@ int main(int argc, char *argv[])
// Make the fluxes absolute
if (mesh.changing())
{
fvc::makeAbsolute(phi, U);
phi = fvc::interpolate(U) & mesh.Sf();
}
scalar timeBeforeMeshUpdate = runTime.elapsedCpuTime();
......@@ -100,7 +100,7 @@ int main(int argc, char *argv[])
}
// Keep the absolute fluxes for use in ddtPhiCorr
surfaceScalarField phiAbs("phiAbs", phi);
surfaceScalarField phiAbs0("phiAbs0", phi);
// Make the fluxes relative to the mesh motion
if (mesh.changing())
......@@ -125,8 +125,6 @@ int main(int argc, char *argv[])
#include "pEqn.H"
}
#include "continuityErrs.H"
p = pd + rho*gh;
if (pd.needReference())
......
applications/solvers/multiphase/interDyMFoam/pEqn.H
View file @ 4a2a23a7
......@@ -2,21 +2,42 @@
volScalarField rAU = 1.0/UEqn.A();
surfaceScalarField rAUf = fvc::interpolate(rAU);
volVectorField HU = UEqn.H();
U = rAU*HU;
U = rAU*UEqn.H();
surfaceScalarField phiU("phiU", (fvc::interpolate(U) & mesh.Sf()));
if (ddtPhiCorr)
{
phiU += fvc::ddtPhiCorr(rAU, rho, U, phiAbs);
//phiU += fvc::ddtPhiCorr(rAU, rho, U, phiAbs0);
dimensionedScalar rDeltaT = 1.0/mesh.time().deltaT();
volScalarField V0byV
(
IOobject
(
"V0byV",
mesh.time().timeName(),
mesh
),
mesh,
dimensionedScalar("V0byV", dimless, 1),
zeroGradientFvPatchScalarField::typeName
);
V0byV.dimensionedInternalField() = mesh.V0()/mesh.V();
V0byV.correctBoundaryConditions();
phiU += rDeltaT*
(
fvc::interpolate(rAU*rho.oldTime()*V0byV)*phiAbs0
- (fvc::interpolate(rAU*rho.oldTime()*V0byV*U.oldTime()) & mesh.Sf())
);
}
phi = phiU +
(
fvc::interpolate(interface.sigmaK())*fvc::snGrad(gamma)
- ghf*fvc::snGrad(rho)
)*rAUf*mesh.magSf();
(
fvc::interpolate(interface.sigmaK())*fvc::snGrad(gamma)
- ghf*fvc::snGrad(rho)
)*rAUf*mesh.magSf();
if (pd.needReference())
{
......@@ -59,6 +80,8 @@
U += rAU*fvc::reconstruct((phi - phiU)/rAUf);
U.correctBoundaryConditions();
#include "continuityErrs.H"
// Make the fluxes relative to the mesh motion
fvc::makeRelative(phi, U);
}
applications/utilities/mesh/conversion/ccm26ToFoam/Allwmake
View file @ 4a2a23a7
#!/bin/sh
set -x
# Some fun: prostar uses ccmio2.3, Star-ccm+ uses ccmio2.4
# compile cd-adapco's CCM library
wmake libso libccmio/libadf
wmake libso libccmio/libccmio
wmake libso libccmio/libcgns
(cd libccmio; wmake libso libadf)
(cd libccmio; wmake libso libccmio)
(cd libccmio; wmake libso libcgns)
(cd ccm26ToFoam; wmake)
wmake ccm26ToFoam
bin/foamDiffSourceList
View file @ 4a2a23a7
......@@ -72,6 +72,7 @@ find -H $newDir \
! -type d -type f \
! -name "*~" \
-a ! -name ".*~" \
-a ! -name ".#*" \
-a ! -name "*.orig" \
-a ! -name "*.dep" \
-a ! -name "*.o" \
......@@ -83,10 +84,11 @@ find -H $newDir \
-a ! -name "log[0-9]*" \
| sed \
-e "\@$newDir/lib/@d" \
-e "\@$newDir/src/mico-[0-9.]*/platforms@d" \
-e "\@$newDir/src/mpich-[0-9.]*/platforms@d" \
-e "\@$newDir/src/mpich-[0-9.]*/lib@d" \
-e "\@$newDir/src/lam-[0-9.]*/platforms@d" \
-e "\@$newDir/src/other/mico-*/platforms@d" \
-e "\@$newDir/src/other/mpich-*/platforms@d" \
-e "\@$newDir/src/other/mpich-*/lib@d" \
-e "\@$newDir/src/other/lam-*/platforms@d" \
-e "\@$newDir/src/other/openmpi-*/platforms@d" \
-e '\@applications/bin/@d' \
-e '\@/t/@d' \
-e '\@Make[.A-Za-z]*/[^/]*/@d' \
......@@ -118,7 +120,7 @@ find -H $newDir \
done
)
# file fileCount
# file fileCount
fileCount=$(cat $tmpFile | wc -l)
echo "----------------------------------------------------------------------"
echo "pack $fileCount changed/new files"
......
bin/foamPack
View file @ 4a2a23a7
......@@ -86,10 +86,11 @@ find -H $packDir \
-a ! -name "so_locations" \
| sed \
-e "\@$packDir/lib/@d" \
-e "\@$packDir/src/mico-[0-9.]*/platforms@d" \
-e "\@$packDir/src/mpich-[0-9.]*/platforms@d" \
-e "\@$packDir/src/mpich-[0-9.]*/lib@d" \
-e "\@$packDir/src/lam-[0-9.]*/platforms@d" \
-e "\@$packDir/src/other/mico-*/platforms@d" \
-e "\@$packDir/src/other/mpich-*/platforms@d" \
-e "\@$packDir/src/other/mpich-*/lib@d" \
-e "\@$packDir/src/other/lam-*/platforms@d" \
-e "\@$packDir/src/other/openmpi-*/platforms@d" \
-e '\@applications/bin/@d' \
-e '\@/t/@d' \
-e '\@Make[.A-Za-z]*/[^/]*/@d' \
......
bin/foamPackSource
View file @ 4a2a23a7
......@@ -75,11 +75,11 @@ find -H $packDir \
-a ! -name "log[0-9]*" \
| sed \
-e "\@$packDir/lib/@d" \
-e "\@$packDir/src/other/mico-[0-9.]*/platforms@d" \
-e "\@$packDir/src/other/mpich-[0-9.]*/platforms@d" \
-e "\@$packDir/src/other/mpich-[0-9.]*/lib@d" \
-e "\@$packDir/src/other/lam-[0-9.]*/platforms@d" \
-e "\@$packDir/src/other/openmpi-[0-9.]*/platforms@d" \
-e "\@$packDir/src/other/mico-*/platforms@d" \
-e "\@$packDir/src/other/mpich-*/platforms@d" \
-e "\@$packDir/src/other/mpich-*/lib@d" \
-e "\@$packDir/src/other/lam-*/platforms@d" \
-e "\@$packDir/src/other/openmpi-*/platforms@d" \
-e '\@applications/bin/@d' \
-e '\@/t/@d' \
-e '\@Make[.A-Za-z]*/[^/]*/@d' \
......
bin/paraFoam
View file @ 4a2a23a7
......@@ -33,33 +33,33 @@
Script=${0##*/}
usage() {
while [ "$#" -ge 1 ]; do echo "$1"; shift; done
cat<<USAGE
while [ "$#" -ge 1 ]; do echo "$1"; shift; done
cat<<USAGE
usage: $Script [-case dir]
* start paraview $ParaView_VERSION with the OpenFOAM libraries
USAGE
exit 1
exit 1
}
# parse options
if [ "$#" -gt 0 ]; then
case "$1" in
-h | -help)
usage
;;
-case)
shift
caseDir=$1
[ "$#" -ge 1 ] || usage "'-case' option requires an argument"
cd "$caseDir" 2>/dev/null || usage "directory does not exist: '$caseDir'"
;;
*)
usage "unknown option/argument: '$*'"
;;
esac
case "$1" in
-h | -help)
usage
;;
-case)
shift
caseDir=$1
[ "$#" -ge 1 ] || usage "'-case' option requires an argument"
cd "$caseDir" 2>/dev/null || usage "directory does not exist: '$caseDir'"
;;
*)
usage "unknown option/argument: '$*'"
;;
esac
fi
# get a sensible caseName
......@@ -67,41 +67,38 @@ caseName=${PWD##*/}
# parent directory for normal or parallel results
case "$caseName" in
processor*) parentDir=".." ;;
*) parentDir="." ;;
processor*) parentDir=".." ;;
*) parentDir="." ;;
esac
# check existence of essential files
for check in system/controlDict system/fvSchemes system/fvSolution
do
[ -s "$parentDir/$check" ] || usage "file does not exist: '$parentDir/$check'"
[ -s "$parentDir/$check" ] || usage "file does not exist: '$parentDir/$check'"
done
OpenFoamExt="foam"
# OpenFoamExt="OpenFOAM"
caseFile="$caseName.foam"
# caseFile="$caseName.OpenFOAM"
if [ "$ParaView_VERSION" = "3" ]; then
case "$ParaView_VERSION" in
2*)
# Clean up on termination and on Ctrl-C
trap "rm -f paraFoam.pvs $caseFile 2>/dev/null; exit 0" EXIT TERM INT
touch $caseFile
# check existence of essential files
for check in system/controlDict system/fvSchemes system/fvSolution
do
[ -s "$parentDir/$check" ] || usage "file does not exist: '$parentDir/$check'"
done
# since we are now in the cwd, %CASE% is '$PWD/$caseFile'
sed -e s@%CASE%@$PWD/$caseFile@g \
$WM_PROJECT_DIR/bin/paraFoam.pvs > paraFoam.pvs
touch $caseName.$OpenFoamExt
paraview --data=$caseName.$OpenFoamExt
rm $caseName.$OpenFoamExt 2>/dev/null
paraview paraFoam.pvs
;;
else
# since we are now in the cwd, FOAM_ROOT/FOAM_CASE is '$PWD'
sed -e s%FOAM_ROOT/FOAM_CASE%$PWD%g \
-e s%FOAM_CASE%$caseName%g $WM_PROJECT_DIR/bin/paraFoam.pvs > paraFoam.pvs
touch $caseName.$OpenFoamExt
paraview paraFoam.pvs
rm paraFoam.pvs $caseName.$OpenFoamExt 2>/dev/null
fi
*)
# Clean up on termination and on Ctrl-C
trap "rm -f $caseFile 2>/dev/null; exit 0" EXIT TERM INT
touch $caseFile
paraview --data=$caseFile
;;
esac
#------------------------------------------------------------------------------
etc/apps/paraview3/bashrc
View file @ 4a2a23a7
......@@ -41,18 +41,26 @@ export CMAKE_HOME=$WM_PROJECT_INST_DIR/$WM_ARCH/cmake-2.4.6
if [ -r $CMAKE_HOME ]; then
export PATH=$CMAKE_HOME/bin:$PATH
else
unset CMAKE_HOME
fi
export ParaView_VERSION=3
# export ParaView_VERSION="3.3-cvs"
export ParaView_VERSION=3.3
export ParaView_INST_DIR=$WM_PROJECT_INST_DIR/ParaView3.3-cvs
export ParaView_INST_DIR=$WM_PROJECT_INST_DIR/paraview-$ParaView_VERSION
export ParaView_DIR=$ParaView_INST_DIR/platforms/$WM_OPTIONS
export PYTHONPATH=$PYTHONPATH:$ParaView_DIR/bin:$ParaView_DIR/Utilities/VTKPythonWrapping
if [ "$PYTHONPATH" ]; then
export PYTHONPATH=$PYTHONPATH:$ParaView_DIR/Utilities/VTKPythonWrapping
else
export PYTHONPATH=$ParaView_DIR/Utilities/VTKPythonWrapping
fi
if [ -r $ParaView_DIR ]; then
export PATH=$ParaView_DIR/bin:$PATH
export LD_LIBRARY_PATH=${ParaView_DIR}/bin:${LD_LIBRARY_PATH}
export LD_LIBRARY_PATH=$ParaView_DIR/lib/paraview-$ParaView_VERSION:$LD_LIBRARY_PATH
export PV_PLUGIN_PATH=$FOAM_LIBBIN
fi
......
etc/apps/paraview3/cshrc
View file @ 4a2a23a7
......@@ -41,11 +41,14 @@ setenv CMAKE_HOME $WM_PROJECT_INST_DIR/$WM_ARCH/cmake-2.4.6
if ( -r $CMAKE_HOME ) then
set path=($CMAKE_HOME/bin $path)
else
unset CMAKE_HOME
endif
setenv ParaView_VERSION 3
# setenv ParaView_VERSION 3.3-cvs
setenv ParaView_VERSION 3.3
setenv ParaView_INST_DIR $WM_PROJECT_INST_DIR/ParaView3.3-cvs
export ParaView_INST_DIR=$WM_PROJECT_INST_DIR/paraview-$ParaView_VERSION
setenv ParaView_DIR $ParaView_INST_DIR/platforms/$WM_OPTIONS
if ($?PYTHONPATH) then
......@@ -56,7 +59,7 @@ endif
if ( -r $ParaView_INST_DIR ) then
set path=($ParaView_DIR/bin $path)
setenv LD_LIBRARY_PATH ${ParaView_DIR}/bin:${LD_LIBRARY_PATH}
setenv LD_LIBRARY_PATH $ParaView_DIR/lib/paraview-$ParaView_VERSION:$LD_LIBRARY_PATH
setenv PV_PLUGIN_PATH $FOAM_LIBBIN
endif
......
etc/bashrc
View file @ 4a2a23a7
......@@ -63,7 +63,7 @@ export WM_PROJECT_USER_DIR=$HOME/$WM_PROJECT/$USER-$WM_PROJECT_VERSION
# Compiler (if set to "" use the system compiler)
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
export WM_COMPILER=Gcc
export WM_COMPILER=Gcc43
export WM_COMPILER_ARCH=
export WM_COMPILER_LIB_ARCH=
......
etc/settings.sh
View file @ 4a2a23a7
......@@ -97,7 +97,14 @@ WM_COMPILER_INST=OpenFOAM
case "$WM_COMPILER_INST" in
OpenFOAM)
export WM_COMPILER_DIR=$FOAM_INST_DIR/$WM_ARCH/gcc-4.2.2$WM_COMPILER_ARCH
case "$WM_COMPILER" in
Gcc43)
export WM_COMPILER_DIR=$FOAM_INST_DIR/$WM_ARCH/gcc-4.3.0$WM_COMPILER_ARCH
;;
Gcc)
export WM_COMPILER_DIR=$FOAM_INST_DIR/$WM_ARCH/gcc-4.2.2$WM_COMPILER_ARCH
;;
esac
# Check that the compiler directory can be found
if [ ! -d "$WM_COMPILER_DIR" ]
......
src/OpenFOAM/containers/HashTables/HashTable/HashTable.C
View file @ 4a2a23a7
......@@ -202,7 +202,12 @@ List<Key> HashTable<T, Key, Hash>::toc() const
template<class T, class Key, class Hash>
bool HashTable<T, Key, Hash>::insert(const Key& key, const T& newEntry)
bool HashTable<T, Key, Hash>::set
(
const Key& key,
const T& newEntry,
const bool protect
)
{
if (tableSize_ == 0)
{
......@@ -210,40 +215,70 @@ bool HashTable<T, Key, Hash>::insert(const Key& key, const T& newEntry)
}
label ii = Hash()(key, tableSize_);
hashedEntry* existing = 0;
hashedEntry* prev = 0;
for (hashedEntry* n=table_[ii]; n; n=n->next_)
for (hashedEntry* curr = table_[ii]; curr; curr = curr->next_)
{
if (key == n->key_)
if (key == curr->key_)
{
existing = curr;
break;
}
prev = curr;
}
// not found, insert it at the head
if (!existing)
{
table_[ii] = new hashedEntry(key, table_[ii], newEntry);
nElmts_++;
if (double(nElmts_)/tableSize_ > 0.8)
{
# ifdef FULLDEBUG
if (debug)
{
Info<< "HashTable<T, Key, Hash>::insert"
"(const Key& key, T newEntry) : "
"Cannot insert " << key << " already in hash table\n";
Info<< "HashTable<T, Key, Hash>::set"
"(const Key& key, T newEntry) : "
"Doubling table size\n";
}
# endif
return false;
resize(2*tableSize_);
}
}
table_[ii] = new hashedEntry(key, table_[ii], newEntry);
nElmts_++;
if (double(nElmts_)/tableSize_ > 0.8)
else if (protect)
{
// found - but protected from overwriting
// this corresponds to the STL 'insert' convention
# ifdef FULLDEBUG
if (debug)
{
Info<< "HashTable<T, Key, Hash>::insert"
"(const Key& key, T newEntry) : "
"Doubling table size\n";
Info<< "HashTable<T, Key, Hash>::set"
"(const Key& key, T newEntry, false) : "
"Cannot insert " << key << " already in hash table\n";
}
# endif
return false;
}
else
{
// found - overwrite existing entry
// this corresponds to the Perl convention
hashedEntry* elemPtr = new hashedEntry(key, existing->next_, newEntry);
// replace existing element - within list or insert at the head
if (prev)
{
prev->next_ = elemPtr;
}
else
{
table_[ii] = elemPtr;
}
resize(2*tableSize_);