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Commit 4e700e62 authored by Mark Olesen's avatar Mark Olesen
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surfMesh - moved more things to PrimitiveMeshedSurface

parent 82a481a6
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applications/utilities/surface/surfaceCoordinateSystemTransform/surfaceCoordinateSystemTransform.C
View file @ 4e700e62
......@@ -185,8 +185,8 @@ int main(int argc, char *argv[])
if
(
!meshedSurface::canRead(importName.ext(), true)
|| !meshedSurface::canWrite(exportName.ext(), true)
!meshedSurface::canRead(importName, true)
|| !meshedSurface::canWriteType(exportName.ext(), true)
)
{
return 1;
......@@ -194,7 +194,7 @@ int main(int argc, char *argv[])
{
meshedSurface surf(importName);
MeshedSurface<face> surf(importName);
if (args.options().found("clean"))
{
......
src/surfMesh/MeshedSurface/MeshedSurface.C
View file @ 4e700e62
......@@ -55,7 +55,7 @@ bool Foam::MeshedSurface<Face>::canReadType
return true;
}
return UnsortedMeshedSurface<Face>::canRead(ext, verbose);
return UnsortedMeshedSurface<Face>::canReadType(ext, verbose);
}
......@@ -607,6 +607,41 @@ void Foam::MeshedSurface<Face>::sortFacesByRegion
}
template<class Face>
void Foam::MeshedSurface<Face>::remapRegions(List<label>& faceMap)
{
// recalculate the patch start/size
if (faceMap.size())
{
label newFaceI = 0;
label oldPatchEnd = 0;
forAll(patches_, patchI)
{
surfGroup& p = patches_[patchI];
// adjust patch start
p.start() = newFaceI;
oldPatchEnd += p.size();
for (label faceI = newFaceI; faceI < faceMap.size(); ++faceI)
{
if (faceMap[faceI] < oldPatchEnd)
{
++newFaceI;
}
else
{
break;
}
}
// adjust patch size
p.size() = newFaceI - p.start();
}
faceMap.clear();
}
}
// * * * * * * * * * * * * Protected Member Functions * * * * * * * * * * * //
......@@ -650,47 +685,52 @@ Foam::MeshedSurface<Face> Foam::MeshedSurface<Face>::subsetMesh
newPatches[patchI].size() = 0;
}
// Renumber face node labels and compact
// Renumber face node labels
List<Face> newFaces(faceMap.size());
forAll(faceMap, faceI)
{
const label origFaceI = faceMap[faceI];
const Face& oldFace = locFaces[origFaceI];
newFaces[faceI] = Face(oldFace);
newFaces[faceI] = Face(locFaces[origFaceI]);
// Renumber labels for face
Face& f = newFaces[faceI];
forAll(f, fp)
{
f[fp] = oldToNew[oldFace[fp]];
f[fp] = oldToNew[f[fp]];
}
}
oldToNew.clear();
// recalculate the patch start/size
label newFaceI = 0;
label oldPatchEnd = 0;
// adjust patch sizes
forAllReverse(newPatches, patchI)
// adjust patch sizes
forAll(newPatches, patchI)
{
surfGroup& p = newPatches[patchI];
// adjust patch start
p.start() = newFaceI;
oldPatchEnd += p.size();
for (label faceI = newFaceI; faceI < faceMap.size(); ++faceI)
{
if
(
origFaceI >= patches_[patchI].start()
&& patches_[patchI].size()
)
if (faceMap[faceI] < oldPatchEnd)
{
++newFaceI;
}
else
{
newPatches[patchI].size()++;
break;
}
}
}
oldToNew.clear();
// adjust patch start
label startFaceI = 0;
forAll(newPatches, patchI)
{
newPatches[patchI].start() = startFaceI;
startFaceI += newPatches[patchI].size();
// adjust patch size
p.size() = newFaceI - p.start();
}
// construct a sub-surface
return MeshedSurface
(
......
src/surfMesh/MeshedSurface/MeshedSurface.H
View file @ 4e700e62
......@@ -101,6 +101,9 @@ private:
//- Sort faces by regionIds and set patches
void sortFacesByRegion(const UList<label>&, const Map<word>&);
//- Set new regions from faceMap
void remapRegions(List<label>& faceMap);
//- Read OpenFOAM Surface format
bool read(Istream&);
......@@ -276,11 +279,15 @@ public:
void cleanup(const bool verbose);
//- Check/fix duplicate/degenerate faces
void checkFaces(const bool verbose);
virtual bool checkFaces(const bool verbose);
//- Join the faces by removing duplicate points.
// Returns true if any points merged
bool stitchFaces(const scalar tol=SMALL, const bool verbose=false);
virtual bool stitchFaces
(
const scalar tol=SMALL,
const bool verbose=false
);
//- Triangulate the surface, return the number of added faces.
// The patch list will be adjusted accordingly.
......
src/surfMesh/MeshedSurface/MeshedSurfaceCleanup.C
View file @ 4e700e62
......@@ -48,284 +48,34 @@ bool Foam::MeshedSurface<Face>::stitchFaces
const bool verbose
)
{
pointField& pointLst = this->storedPoints();
List<label> faceMap;
bool hasMerged = ParentType::stitchFaces(faceMap, tol, verbose);
// Merge points
labelList pointMap(pointLst.size());
pointField newPoints(pointLst.size());
bool hasMerged = mergePoints(pointLst, tol, verbose, pointMap, newPoints);
if (!hasMerged)
{
return false;
}
if (verbose)
{
Info<< "MeshedSurface::stitchFaces : Renumbering all faces"
<< endl;
}
// Set the coordinates to the merged ones
pointLst.transfer(newPoints);
List<Face>& faceLst = this->storedFaces();
// ensure we have at some patches, and they cover all the faces
checkPatches();
// Reset the point labels to the unique points array
label oldFaceI = 0;
label newFaceI = 0;
forAll(patches_, patchI)
{
surfGroup& p = patches_[patchI];
// adjust patch start
p.start() = newFaceI;
label patchEnd = oldFaceI + p.size();
for (; oldFaceI < patchEnd; ++oldFaceI)
{
Face& f = faceLst[oldFaceI];
forAll(f, fp)
{
f[fp] = pointMap[f[fp]];
}
if (f.collapse() >= 3)
{
if (newFaceI != oldFaceI)
{
faceLst[newFaceI] = f;
}
newFaceI++;
}
else if (verbose)
{
Pout<< "MeshedSurface::stitchFaces : "
<< "Removing collapsed face " << oldFaceI << endl
<< " vertices :" << f << endl;
}
}
// adjust patch size
p.size() = newFaceI - p.start();
}
if (newFaceI != faceLst.size())
{
if (verbose)
{
Pout<< "MeshedSurface::stitchFaces : "
<< "Removed " << faceLst.size() - newFaceI
<< " faces" << endl;
}
faceLst.setSize(newFaceI);
}
// Merging points might have changed geometric factors
ParentType::clearOut();
return true;
remapRegions(faceMap);
return hasMerged;
}
// Remove badly degenerate faces and double faces.
template<class Face>
void Foam::MeshedSurface<Face>::checkFaces(const bool verbose)
bool Foam::MeshedSurface<Face>::checkFaces(const bool verbose)
{
// Simple check on indices ok.
const label maxPointI = this->points().size() - 1;
List<Face>& faceLst = this->storedFaces();
// Phase 0: detect badly labelled faces
forAll(faceLst, faceI)
{
const Face& f = faceLst[faceI];
forAll(f, fp)
{
if (f[fp] < 0 || f[fp] > maxPointI)
{
FatalErrorIn("MeshedSurface::checkFaces(bool)")
<< "face " << f
<< " uses point indices outside point range 0.."
<< maxPointI
<< exit(FatalError);
}
}
}
// ensure we have patches, and they cover all the faces
checkPatches();
// Phase 1: find and skip over invalid faces
// Phase 2: pack
const labelListList& fFaces = this->faceFaces();
label oldFaceI = 0;
label newFaceI = 0;
forAll(patches_, patchI)
{
surfGroup& p = patches_[patchI];
// correct the patch start
p.start() = newFaceI;
label patchEnd = oldFaceI + p.size();
for (; oldFaceI < patchEnd; ++oldFaceI)
{
Face& f = faceLst[oldFaceI];
List<label> faceMap;
bool changed = ParentType::checkFaces(faceMap, verbose);
// 'degenerate' face check
if (f.collapse() >= 3)
{
// duplicate face check
bool okay = true;
const labelList& neighbours = fFaces[oldFaceI];
// Check if faceNeighbours use same points as this face.
// Note: discards normal information - sides of baffle are merged.
forAll(neighbours, neighI)
{
if (neighbours[neighI] <= oldFaceI)
{
// lower numbered faces already checked
continue;
}
const Face& nei = faceLst[neighbours[neighI]];
if (f == nei)
{
okay = false;
if (verbose)
{
WarningIn
(
"MeshedSurface::checkFaces(bool verbose)"
) << "faces share the same vertices:\n"
<< " face 1 :" << oldFaceI << endl;
// printFace(Warning, " ", f, points());
Warning
<< endl
<< " face 2 :"
<< neighbours[neighI] << endl;
// printFace(Warning, " ", nei, points());
}
break;
}
}
if (okay)
{
if (newFaceI != oldFaceI)
{
faceLst[newFaceI] = f;
}
newFaceI++;
}
}
else if (verbose)
{
WarningIn
(
"MeshedSurface::checkFaces(bool verbose)"
) << "face " << oldFaceI
<< " has fewer than three unique vertices:\n";
// printTriangle(Warning, " ", f, points());
}
}
// adjust patch size
p.size() = newFaceI - p.start();
}
if (newFaceI < faceLst.size())
{
if (verbose)
{
WarningIn
(
"MeshedSurface::checkFaces(bool verbose)"
) << "Removed " << faceLst.size() - newFaceI
<< " illegal faces." << endl;
}
faceLst.setSize(newFaceI);
// Topology can change because of renumbering
ParentType::clearOut();
}
remapRegions(faceMap);
return changed;
}
template<class Face>
Foam::label Foam::MeshedSurface<Face>::triangulate()
{
label nTri = 0;
List<Face>& faceLst = this->storedFaces();
// determine how many triangles are needed
forAll(faceLst, faceI)
{
nTri += faceLst[faceI].size() - 2;
}
// nothing to do
if (nTri <= faceLst.size())
{
return 0;
}
List<Face> newFaces(nTri);
// note the number of *additional* faces
nTri -= faceLst.size();
// Reset the point labels to the unique points array
label oldFaceI = 0;
label newFaceI = 0;
forAll(patches_, patchI)
{
surfGroup& p = patches_[patchI];
// adjust patch start
p.start() = newFaceI;
label patchEnd = oldFaceI + p.size();
for (; oldFaceI < patchEnd; ++oldFaceI)
{
const Face& f = faceLst[oldFaceI];
triFace fTri;
// Do simple face triangulation around f[0].
// we could also use face::triangulation
fTri[0] = f[0];
for (label fp = 1; fp < f.size() - 1; ++fp)
{
label fp1 = (fp + 1) % f.size();
fTri[1] = f[fp];
fTri[2] = f[fp1];
newFaces[newFaceI++] = fTri;
}
}
// adjust patch size
p.size() = newFaceI - p.start();
}
faceLst.transfer(newFaces);
List<label> faceMap;
label nTri = ParentType::triangulate(this->storedFaces(), faceMap);
remapRegions(faceMap);
return nTri;
}
......
src/surfMesh/MeshedSurface/MeshedSurfaceIO.C
View file @ 4e700e62
......@@ -53,7 +53,6 @@ bool Foam::MeshedSurface<Face>::read(Istream& is)
// read points:
is >> this->storedPoints();
#if 1
// must triangulate?
if (this->isTri())
{
......@@ -67,7 +66,7 @@ bool Foam::MeshedSurface<Face>::read(Istream& is)
);
surf.addPatches(patches_);
// this will break if the triangulation uses points
// this will break if the triangulation needed points
surf.triangulate();
patches_ = surf.patches();
......@@ -86,7 +85,6 @@ bool Foam::MeshedSurface<Face>::read(Istream& is)
this->storedFaces().transfer(newFaces);
}
else
#endif
{
// read faces:
is >> this->storedFaces();
......
src/surfMesh/PrimitiveMeshedSurface/PrimitiveMeshedSurface.C
View file @ 4e700e62
......@@ -25,6 +25,7 @@ License
\*---------------------------------------------------------------------------*/
#include "PrimitiveMeshedSurface.H"
#include "mergePoints.H"
// * * * * * * * * * * * * * Static Member Functions * * * * * * * * * * * * //
......@@ -35,6 +36,75 @@ inline bool Foam::PrimitiveMeshedSurface<Face>::isTri()
}
template<class Face>
Foam::label Foam::PrimitiveMeshedSurface<Face>::triangulate
(
List<Face>& faceLst,
List<label>& faceMap
)
{
label nTri = 0;
// determine how many triangles are needed
forAll(faceLst, faceI)
{
nTri += faceLst[faceI].size() - 2;
}
// nothing to do
if (nTri <= faceLst.size())
{
if (&faceMap)
{
faceMap.clear();
}
return 0;
}
List<Face> newFaces(nTri);
List<label> fMap(nTri);
// remember the number of *additional* faces
nTri -= faceLst.size();
label newFaceI = 0;
forAll(faceLst, faceI)
{
const Face& f = faceLst[faceI];
triFace fTri;
// Do simple face triangulation around f[0].
// we could also use face::triangulation, but that requires points
// and doesn't currently template nicely
fTri[0] = f[0];
for (label fp = 1; fp < f.size() - 1; ++fp)
{
label fp1 = (fp + 1) % f.size();
fTri[1] = f[fp];
fTri[2] = f[fp1];
newFaces[newFaceI] = fTri;
fMap[newFaceI] = faceI;
newFaceI++;
}
}
faceLst.transfer(newFaces);
if (&faceMap)
{
faceMap.transfer(fMap);
}
else
{
fMap.clear();
}
return nTri;
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
template<class Face>
......@@ -130,6 +200,276 @@ void Foam::PrimitiveMeshedSurface<Face>::reset
}
template<class Face>
bool Foam::PrimitiveMeshedSurface<Face>::stitchFaces
(
List<label>& faceMap,
const scalar tol,
const bool verbose
)
{
pointField& pointLst = this->storedPoints();
// Merge points
labelList pointMap(pointLst.size());
pointField newPoints(pointLst.size());
bool hasMerged = mergePoints(pointLst, tol, verbose, pointMap, newPoints);
if (!hasMerged)
{
if (&faceMap)
{
faceMap.clear();
}
return false;
}
if (verbose)