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Commit 9a7c6287 authored by Henry Weller's avatar Henry Weller
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etc/config.*: Separate MPI settings into separate files and upgrade OpenMPI to 10.0.2

parent 45253d62
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etc/bashrc
View file @ 9a7c6287
......@@ -217,6 +217,7 @@ _foamSource $WM_PROJECT_DIR/etc/config.sh/aliases
# Source user setup files for optional packages
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config.sh/mpi`
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config.sh/paraview`
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config.sh/ensight`
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config.sh/gperftools`
......
etc/config.csh/mpi 0 → 100644
View file @ 9a7c6287
#----------------------------------*-sh-*--------------------------------------
# ========= |
# \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
# \\ / O peration |
# \\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
# \\/ M anipulation |
#------------------------------------------------------------------------------
# License
# This file is part of OpenFOAM.
#
# OpenFOAM is free software: you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
# for more details.
#
# You should have received a copy of the GNU General Public License
# along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
#
# File
# etc/config.csh/mpi
#
# Description
# Startup file for communications library (MPI) for OpenFOAM
# Sourced from OpenFOAM-<VERSION>/etc/bashrc
#
#------------------------------------------------------------------------------
# Communications library
# ~~~~~~~~~~~~~~~~~~~~~~
unsetenv MPI_ARCH_PATH MPI_HOME FOAM_MPI_LIBBIN
switch ("$WM_MPLIB")
case SYSTEMOPENMPI:
# Use the system installed openmpi, get library directory via mpicc
setenv FOAM_MPI openmpi-system
set libDir=`mpicc --showme:link | sed -e 's/.*-L\([^ ]*\).*/\1/'`
# Bit of a hack: strip off 'lib' and hope this is the path to openmpi
# Include files and libraries.
setenv MPI_ARCH_PATH "${libDir:h}"
_foamAddLib $libDir
unset libDir
breaksw
case OPENMPI:
setenv FOAM_MPI openmpi-1.10.2
# Optional configuration tweaks:
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config.csh/openmpi`
setenv MPI_ARCH_PATH $WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$FOAM_MPI
# Tell OpenMPI where to find its install directory
setenv OPAL_PREFIX $MPI_ARCH_PATH
_foamAddPath $MPI_ARCH_PATH/bin
# 64-bit on OpenSuSE 12.1 uses lib64 others use lib
_foamAddLib $MPI_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH
_foamAddLib $MPI_ARCH_PATH/lib
_foamAddMan $MPI_ARCH_PATH/share/man
breaksw
case SYSTEMMPI:
setenv FOAM_MPI mpi-system
if ( ! ($?MPI_ROOT) ) then
echo
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " Please set the environment variable MPI_ROOT to point to" \
" the base folder for the system MPI in use."
echo " Example:"
echo
echo " setenv MPI_ROOT /opt/mpi"
echo
else
setenv MPI_ARCH_PATH $MPI_ROOT
if ( ! ($?MPI_ARCH_FLAGS) ) then
echo
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ARCH_FLAGS is not set. Example:"
echo
echo ' setenv MPI_ARCH_FLAGS "-DOMPI_SKIP_MPICXX"'
echo
endif
if ( ! ($?MPI_ARCH_INC) ) then
echo
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ARCH_INC is not set. Example:"
echo
echo ' setenv MPI_ARCH_INC "-isystem $MPI_ROOT/include"'
echo
endif
if ( ! ($?MPI_ARCH_LIBS) ) then
echo
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ARCH_LIBS is not set. Example:"
echo
echo ' setenv MPI_ARCH_LIBS "-L$MPI_ROOT/lib -lmpi"'
echo
endif
endif
breaksw
case MPICH:
setenv FOAM_MPI mpich2-1.1.1p1
setenv MPI_HOME $WM_THIRD_PARTY_DIR/$FOAM_MPI
setenv MPI_ARCH_PATH $WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$FOAM_MPI
_foamAddPath $MPI_ARCH_PATH/bin
# 64-bit on OpenSuSE 12.1 uses lib64 others use lib
_foamAddLib $MPI_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH
_foamAddLib $MPI_ARCH_PATH/lib
_foamAddMan $MPI_ARCH_PATH/share/man
breaksw
case MPICH-GM:
setenv FOAM_MPI mpich-gm
setenv MPI_ARCH_PATH /opt/mpi
setenv MPICH_PATH $MPI_ARCH_PATH
setenv GM_LIB_PATH /opt/gm/lib64
_foamAddPath $MPI_ARCH_PATH/bin
# 64-bit on OpenSuSE 12.1 uses lib64 others use lib
_foamAddLib $MPI_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH
_foamAddLib $MPI_ARCH_PATH/lib
_foamAddLib $GM_LIB_PATH
breaksw
case HPMPI:
setenv FOAM_MPI hpmpi
setenv MPI_HOME /opt/hpmpi
setenv MPI_ARCH_PATH $MPI_HOME
_foamAddPath $MPI_ARCH_PATH/bin
switch (`uname -m`)
case i686:
_foamAddLib $MPI_ARCH_PATH/lib/linux_ia32
breaksw
case x86_64:
_foamAddLib $MPI_ARCH_PATH/lib/linux_amd64
breaksw
case ia64:
_foamAddLib $MPI_ARCH_PATH/lib/linux_ia64
breaksw
default:
echo Unknown processor type `uname -m` for Linux
breaksw
endsw
breaksw
case MPI:
setenv FOAM_MPI mpi
setenv MPI_ARCH_PATH /opt/mpi
breaksw
case FJMPI:
setenv FOAM_MPI fjmpi
setenv MPI_ARCH_PATH /opt/FJSVmpi2
_foamAddPath $MPI_ARCH_PATH/bin
_foamAddLib $MPI_ARCH_PATH/lib/sparcv9
_foamAddLib /opt/FSUNf90/lib/sparcv9
_foamAddLib /opt/FJSVpnidt/lib
breaksw
case QSMPI:
setenv FOAM_MPI qsmpi
setenv MPI_ARCH_PATH /usr/lib/mpi
_foamAddPath $MPI_ARCH_PATH/bin
_foamAddLib $MPI_ARCH_PATH/lib
breaksw
case SGIMPI:
if ( ! $?MPI_ROOT) setenv MPI_ROOT /dummy
if ( ! -d "$MPI_ROOT" ) then
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ROOT not a valid mpt installation directory."
echo " Please set MPI_ROOT to the mpt installation directory."
echo " (usually done by loading the mpt module)"
echo " MPI_ROOT currently set to '$MPI_ROOT'"
endif
if ( "${MPI_ROOT:h}/" == $MPI_ROOT ) then
setenv MPI_ROOT ${MPI_ROOT:h}
endif
setenv FOAM_MPI ${MPI_ROOT:t}
setenv MPI_ARCH_PATH $MPI_ROOT
if ($?FOAM_VERBOSE && $?prompt) then
echo "Using SGI MPT:"
echo " MPI_ROOT : $MPI_ROOT"
echo " FOAM_MPI : $FOAM_MPI"
endif
_foamAddPath $MPI_ARCH_PATH/bin
_foamAddLib $MPI_ARCH_PATH/lib
breaksw
case INTELMPI:
if ( ! $?MPI_ROOT) setenv MPI_ROOT /dummy
if ( ! -d "$MPI_ROOT" ) then
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ROOT not a valid mpt installation directory."
echo " Please set MPI_ROOT to the mpt installation directory."
echo " (usually done by loading the mpt module)"
echo " MPI_ROOT currently set to '$MPI_ROOT'"
endif
if ( "${MPI_ROOT:h}/" == $MPI_ROOT ) then
setenv MPI_ROOT ${MPI_ROOT:h}
endif
setenv FOAM_MPI ${MPI_ROOT:t}
setenv MPI_ARCH_PATH $MPI_ROOT
if ($?FOAM_VERBOSE && $?prompt) then
echo "Using INTEL MPT:"
echo " MPI_ROOT : $MPI_ROOT"
echo " FOAM_MPI : $FOAM_MPI"
endif
_foamAddPath $MPI_ARCH_PATH/bin64
_foamAddLib $MPI_ARCH_PATH/lib64
breaksw
default:
setenv FOAM_MPI dummy
breaksw
endsw
# Add (non-dummy) MPI implementation
# Dummy MPI already added to LD_LIBRARY_PATH and has no external libraries
if ( "$FOAM_MPI" != dummy ) then
_foamAddLib ${FOAM_LIBBIN}/${FOAM_MPI}:${FOAM_EXT_LIBBIN}/${FOAM_MPI}
endif
# Set the minimum MPI buffer size (used by all platforms except SGI MPI)
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
if ( ! $?minBufferSize ) set minBufferSize=20000000
if ( $?MPI_BUFFER_SIZE ) then
if ( $MPI_BUFFER_SIZE < $minBufferSize ) then
setenv MPI_BUFFER_SIZE $minBufferSize
endif
else
setenv MPI_BUFFER_SIZE $minBufferSize
endif
# ----------------------------------------------------------------- end-of-file
etc/config.csh/settings
View file @ 9a7c6287
......@@ -337,251 +337,6 @@ default:
endsw
# Communications library
# ~~~~~~~~~~~~~~~~~~~~~~
unsetenv MPI_ARCH_PATH MPI_HOME FOAM_MPI_LIBBIN
switch ("$WM_MPLIB")
case SYSTEMOPENMPI:
# Use the system installed openmpi, get library directory via mpicc
setenv FOAM_MPI openmpi-system
set libDir=`mpicc --showme:link | sed -e 's/.*-L\([^ ]*\).*/\1/'`
# Bit of a hack: strip off 'lib' and hope this is the path to openmpi
# Include files and libraries.
setenv MPI_ARCH_PATH "${libDir:h}"
_foamAddLib $libDir
unset libDir
breaksw
case OPENMPI:
setenv FOAM_MPI openmpi-1.10.0
# Optional configuration tweaks:
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config.csh/openmpi`
setenv MPI_ARCH_PATH $WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$FOAM_MPI
# Tell OpenMPI where to find its install directory
setenv OPAL_PREFIX $MPI_ARCH_PATH
_foamAddPath $MPI_ARCH_PATH/bin
# 64-bit on OpenSuSE 12.1 uses lib64 others use lib
_foamAddLib $MPI_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH
_foamAddLib $MPI_ARCH_PATH/lib
_foamAddMan $MPI_ARCH_PATH/share/man
breaksw
case SYSTEMMPI:
setenv FOAM_MPI mpi-system
if ( ! ($?MPI_ROOT) ) then
echo
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " Please set the environment variable MPI_ROOT to point to" \
" the base folder for the system MPI in use."
echo " Example:"
echo
echo " setenv MPI_ROOT /opt/mpi"
echo
else
setenv MPI_ARCH_PATH $MPI_ROOT
if ( ! ($?MPI_ARCH_FLAGS) ) then
echo
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ARCH_FLAGS is not set. Example:"
echo
echo ' setenv MPI_ARCH_FLAGS "-DOMPI_SKIP_MPICXX"'
echo
endif
if ( ! ($?MPI_ARCH_INC) ) then
echo
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ARCH_INC is not set. Example:"
echo
echo ' setenv MPI_ARCH_INC "-isystem $MPI_ROOT/include"'
echo
endif
if ( ! ($?MPI_ARCH_LIBS) ) then
echo
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ARCH_LIBS is not set. Example:"
echo
echo ' setenv MPI_ARCH_LIBS "-L$MPI_ROOT/lib -lmpi"'
echo
endif
endif
breaksw
case MPICH:
setenv FOAM_MPI mpich2-1.1.1p1
setenv MPI_HOME $WM_THIRD_PARTY_DIR/$FOAM_MPI
setenv MPI_ARCH_PATH $WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$FOAM_MPI
_foamAddPath $MPI_ARCH_PATH/bin
# 64-bit on OpenSuSE 12.1 uses lib64 others use lib
_foamAddLib $MPI_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH
_foamAddLib $MPI_ARCH_PATH/lib
_foamAddMan $MPI_ARCH_PATH/share/man
breaksw
case MPICH-GM:
setenv FOAM_MPI mpich-gm
setenv MPI_ARCH_PATH /opt/mpi
setenv MPICH_PATH $MPI_ARCH_PATH
setenv GM_LIB_PATH /opt/gm/lib64
_foamAddPath $MPI_ARCH_PATH/bin
# 64-bit on OpenSuSE 12.1 uses lib64 others use lib
_foamAddLib $MPI_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH
_foamAddLib $MPI_ARCH_PATH/lib
_foamAddLib $GM_LIB_PATH
breaksw
case HPMPI:
setenv FOAM_MPI hpmpi
setenv MPI_HOME /opt/hpmpi
setenv MPI_ARCH_PATH $MPI_HOME
_foamAddPath $MPI_ARCH_PATH/bin
switch (`uname -m`)
case i686:
_foamAddLib $MPI_ARCH_PATH/lib/linux_ia32
breaksw
case x86_64:
_foamAddLib $MPI_ARCH_PATH/lib/linux_amd64
breaksw
case ia64:
_foamAddLib $MPI_ARCH_PATH/lib/linux_ia64
breaksw
default:
echo Unknown processor type `uname -m` for Linux
breaksw
endsw
breaksw
case MPI:
setenv FOAM_MPI mpi
setenv MPI_ARCH_PATH /opt/mpi
breaksw
case FJMPI:
setenv FOAM_MPI fjmpi
setenv MPI_ARCH_PATH /opt/FJSVmpi2
_foamAddPath $MPI_ARCH_PATH/bin
_foamAddLib $MPI_ARCH_PATH/lib/sparcv9
_foamAddLib /opt/FSUNf90/lib/sparcv9
_foamAddLib /opt/FJSVpnidt/lib
breaksw
case QSMPI:
setenv FOAM_MPI qsmpi
setenv MPI_ARCH_PATH /usr/lib/mpi
_foamAddPath $MPI_ARCH_PATH/bin
_foamAddLib $MPI_ARCH_PATH/lib
breaksw
case SGIMPI:
if ( ! $?MPI_ROOT) setenv MPI_ROOT /dummy
if ( ! -d "$MPI_ROOT" ) then
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ROOT not a valid mpt installation directory."
echo " Please set MPI_ROOT to the mpt installation directory."
echo " (usually done by loading the mpt module)"
echo " MPI_ROOT currently set to '$MPI_ROOT'"
endif
if ( "${MPI_ROOT:h}/" == $MPI_ROOT ) then
setenv MPI_ROOT ${MPI_ROOT:h}
endif
setenv FOAM_MPI ${MPI_ROOT:t}
setenv MPI_ARCH_PATH $MPI_ROOT
if ($?FOAM_VERBOSE && $?prompt) then
echo "Using SGI MPT:"
echo " MPI_ROOT : $MPI_ROOT"
echo " FOAM_MPI : $FOAM_MPI"
endif
_foamAddPath $MPI_ARCH_PATH/bin
_foamAddLib $MPI_ARCH_PATH/lib
breaksw
case INTELMPI:
if ( ! $?MPI_ROOT) setenv MPI_ROOT /dummy
if ( ! -d "$MPI_ROOT" ) then
echo "Warning in $WM_PROJECT_DIR/etc/config.csh/settings:"
echo " MPI_ROOT not a valid mpt installation directory."
echo " Please set MPI_ROOT to the mpt installation directory."
echo " (usually done by loading the mpt module)"
echo " MPI_ROOT currently set to '$MPI_ROOT'"
endif
if ( "${MPI_ROOT:h}/" == $MPI_ROOT ) then
setenv MPI_ROOT ${MPI_ROOT:h}
endif
setenv FOAM_MPI ${MPI_ROOT:t}
setenv MPI_ARCH_PATH $MPI_ROOT
if ($?FOAM_VERBOSE && $?prompt) then
echo "Using INTEL MPT:"
echo " MPI_ROOT : $MPI_ROOT"
echo " FOAM_MPI : $FOAM_MPI"
endif
_foamAddPath $MPI_ARCH_PATH/bin64
_foamAddLib $MPI_ARCH_PATH/lib64
breaksw
default:
setenv FOAM_MPI dummy
breaksw
endsw
# Add (non-dummy) MPI implementation
# Dummy MPI already added to LD_LIBRARY_PATH and has no external libraries
if ( "$FOAM_MPI" != dummy ) then
_foamAddLib ${FOAM_LIBBIN}/${FOAM_MPI}:${FOAM_EXT_LIBBIN}/${FOAM_MPI}
endif
# Set the minimum MPI buffer size (used by all platforms except SGI MPI)
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
if ( ! $?minBufferSize ) set minBufferSize=20000000
if ( $?MPI_BUFFER_SIZE ) then
if ( $MPI_BUFFER_SIZE < $minBufferSize ) then
setenv MPI_BUFFER_SIZE $minBufferSize
endif
else
setenv MPI_BUFFER_SIZE $minBufferSize
endif
# Cleanup environment:
# ~~~~~~~~~~~~~~~~~~~~
#- keep _foamAddPath _foamAddLib _foamAddMan
......
etc/config.sh/mpi 0 → 100644
View file @ 9a7c6287
#----------------------------------*-sh-*--------------------------------------
# ========= |
# \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
# \\ / O peration |
# \\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
# \\/ M anipulation |
#------------------------------------------------------------------------------
# License
# This file is part of OpenFOAM.
#
# OpenFOAM is free software: you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
# for more details.
#
# You should have received a copy of the GNU General Public License
# along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
#
# File
# etc/config.sh/mpi
#
# Description
# Startup file for communications library (MPI) for OpenFOAM
# Sourced from OpenFOAM-<VERSION>/etc/bashrc
#
#------------------------------------------------------------------------------
unset MPI_ARCH_PATH MPI_HOME FOAM_MPI_LIBBIN
case "$WM_MPLIB" in
SYSTEMOPENMPI)
# Use the system installed openmpi, get library directory via mpicc
export FOAM_MPI=openmpi-system
libDir=`mpicc --showme:link | sed -e 's/.*-L\([^ ]*\).*/\1/'`
# Bit of a hack: strip off 'lib' and hope this is the path to openmpi
# include files and libraries.
export MPI_ARCH_PATH="${libDir%/*}"
_foamAddLib $libDir
unset libDir
;;
OPENMPI)
export FOAM_MPI=openmpi-1.10.2
# Optional configuration tweaks:
_foamSource `$WM_PROJECT_DIR/bin/foamEtcFile config.sh/openmpi`
export MPI_ARCH_PATH=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$FOAM_MPI
# Tell OpenMPI where to find its install directory
export OPAL_PREFIX=$MPI_ARCH_PATH
_foamAddPath $MPI_ARCH_PATH/bin
# 64-bit on OpenSuSE 12.1 uses lib64 others use lib
_foamAddLib $MPI_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH
_foamAddLib $MPI_ARCH_PATH/lib
_foamAddMan $MPI_ARCH_PATH/share/man
;;
SYSTEMMPI)
export FOAM_MPI=mpi-system
if [ -z "$MPI_ROOT" ]
then
echo 1>&2
echo "Warning in $WM_PROJECT_DIR/etc/config.sh/settings:" 1>&2
echo " Please set the environment variable MPI_ROOT to point to" \
" the base folder for the system MPI in use." 1>&2
echo " Example:" 1>&2
echo 1>&2
echo " export MPI_ROOT=/opt/mpi" 1>&2
echo 1>&2
else
export MPI_ARCH_PATH=$MPI_ROOT
if [ -z "$MPI_ARCH_FLAGS" ]
then
echo 1>&2
echo "Warning in $WM_PROJECT_DIR/etc/config.sh/settings:" 1>&2
echo " MPI_ARCH_FLAGS is not set. Example:" 1>&2
echo 1>&2
echo " export MPI_ARCH_FLAGS=\"-DOMPI_SKIP_MPICXX\"" 1>&2
echo 1>&2
fi
if [ -z "$MPI_ARCH_INC" ]
then
echo 1>&2
echo "Warning in $WM_PROJECT_DIR/etc/config.sh/settings:" 1>&2
echo " MPI_ARCH_INC is not set. Example:" 1>&2
echo 1>&2
echo " export MPI_ARCH_INC=\"-isystem \$MPI_ROOT/include\"" 1>&2
echo 1>&2
fi
if [ -z "$MPI_ARCH_LIBS" ]
then
echo 1>&2
echo "Warning in $WM_PROJECT_DIR/etc/config.sh/settings:" 1>&2