COMP: cvMeshSurfaceSimplify: moved isosurface algo out to ThirdParty

applications/utilities/mesh/generation/cvMesh/cvMeshSurfaceSimplify/Allwmake

+#!/bin/sh
+cd ${0%/*} || exit 1    # run from this directory
+set -x
+
+if [ -d "${FASTDUALOCTREE_SRC_PATH}" ]
+then
+    wmake
+fi
+
+# ----------------------------------------------------------------- end-of-file

applications/utilities/mesh/generation/cvMesh/cvMeshSurfaceSimplify/Make/files

@@ -4,6 +4,7 @@ MarchingCubes/MarchingCubes.cpp
 MarchingCubes/ply.c
 */
 
+/*
 MarchingCubes = fastdualoctree_sgp
 
 $(MarchingCubes)/data_access.cpp
@@ -14,6 +15,7 @@ $(MarchingCubes)/mc_draw.cpp
 $(MarchingCubes)/morton.cpp
 $(MarchingCubes)/opt_octree.cpp
 $(MarchingCubes)/hash_octree.cpp
+*/
 
 cvMeshSurfaceSimplify.C
 

applications/utilities/mesh/generation/cvMesh/cvMeshSurfaceSimplify/Make/options

@@ -6,7 +6,7 @@ EXE_INC = \
     -DUNIX \
     -Wno-old-style-cast \
     /* -IMarchingCubes */ \
-    -I$(MarchingCubes) \
+    -I$(FASTDUALOCTREE_SRC_PATH) \
     -I../conformalVoronoiMesh/lnInclude \
     -I$(LIB_SRC)/edgeMesh/lnInclude \
     -I$(LIB_SRC)/triSurface/lnInclude \
@@ -14,6 +14,7 @@ EXE_INC = \
 
 EXE_LIBS = \
     $(CGAL_LIBS) \
+    -L$(FASTDUALOCTREE_SRC_PATH) -lperf_main \
     -lGL \
     -lconformalVoronoiMesh \
     -ldecompositionMethods -L$(FOAM_LIBBIN)/dummy -lscotchDecomp \

applications/utilities/mesh/generation/cvMesh/cvMeshSurfaceSimplify/fastdualoctree_sgp/CMakeLists.txt

-PROJECT(fastDualOctree)
-
-cmake_minimum_required(VERSION 2.8)
-
-#---------------------------------------------------
-#----- Dependencies
-#---------------------------------------------------
-FIND_PACKAGE(OpenGL REQUIRED)
-if ( OPENGL_FOUND )
-   message( "-- OpenGL found. include=${OPENGL_INCLUDE_DIR}" )
-   include_directories( ${OPENGL_INCLUDE_DIR} )
-endif ( OPENGL_FOUND )
-
-FIND_PACKAGE(ZLIB REQUIRED)
-if ( ZLIB_FOUND )
-   message( "-- zlib found. include=${ZLIB_INCLUDE_DIR}" )
-   include_directories( ${ZLIB_INCLUDE_DIR} )
-endif ( ZLIB_FOUND )
-
-FIND_PACKAGE(PNG REQUIRED)
-if ( PNG_FOUND )
-   message( "-- PNG found. include=${PNG_INCLUDE_DIR}" )
-   include_directories( ${PNG_INCLUDE_DIR} )
-endif ( PNG_FOUND )
-
-##-- GLUI dependency 
-#FIND_PATH(GLUI_INCLUDE_DIR GL/glui.h ~/pub/system/glui-2.36/src/include)
-#FIND_LIBRARY(GLUI_LIBRARIES
-#      NAMES GLUI glui
-#            GLUT glut
-#      PATHS /usr/local/lib/
-#            /usr/lib/
-#            /opt/graphics/OpenGL/lib
-#            /usr/openwin/lib
-#            /usr/shlib
-#            /usr/X11R6/lib
-#            ~/pub/system/glui-2.36/src/lib
-#    )
-#if ( GLUI_INCLUDE_DIR )
-#   message( "-- GL/glui.h found. include=${GLUI_INCLUDE_DIR}" )
-#   include_directories( ${GLUI_INCLUDE_DIR} )
-#else ( GLUI_INCLUDE_DIR )
-#   message( "-- GL/glui.h not found." )
-#endif ( GLUI_INCLUDE_DIR )
-#if ( GLUI_LIBRARIES )
-#   message( "-- libglui found. include=${GLUI_LIBRARIES}" )
-#else( GLUI_LIBRARIES )
-#   message( "-- libglui not found." )
-#endif ( GLUI_LIBRARIES )
-
-#---------------------------------------------------
-# -- Environement variables
-#---------------------------------------------------
-if (UNIX)
-  add_definitions(-DUNIX)
-endif (UNIX)
-if (WIN32)
-  add_definitions(-DWIN32)
-endif (WIN32)
-if (APPLE)
-  add_definitions(-DAPPLE)
-endif (APPLE)
-
-#---------------------------------------------------
-# -- SRCs
-#---------------------------------------------------
-
-SET(Perf_SRC ${Perf_SRC}
-  data_access.cpp  
-  hash_octree.cpp    
-  mc_draw.cpp     
-  opt_octree.cpp  
-  fparser.cpp      
-  leaf_octree.cpp    
-  mem_octree.cpp  
-  fpoptimizer.cpp  
-  MarchingCubes.cpp  
-  morton.cpp      
-  ptr_octree.cpp
-)
-
-#SET(VIZ_SRC ${VIZ_SRC}
-# viz_glui_cmdline.cpp  
-# viz_glui_controls.cpp  
-# viz_glui_draws.cpp  
-# viz_glui_export.cpp  
-# viz_glui_mouse.cpp 
-#)
-
-
-add_executable(perf_main  perf_main ${Perf_SRC})
-target_link_libraries(perf_main ${OPENGL_LIBRARIES} ${ZLIB_LIBRARIES})
-
-
-#add_executable(viz_glui_main viz_glui_main ${Perf_SRC} ${VIZ_SRC} )
-#target_link_libraries(viz_glui_main ${OPENGL_LIBRARIES} ${ZLIB_LIBRARIES} ${PNG_LIBRARIES} ${GLUI_LIBRARIES})

applications/utilities/mesh/generation/cvMesh/cvMeshSurfaceSimplify/fastdualoctree_sgp/README.txt

-
- Statistical optimization of octree searches
- Fast generation of pointerless octree duals
----------------------------------------------------
-Rener Castro, Thomas Lewiner, HŽlio Lopes, Geovan Tavares, Alex Bordignon
-Thomas Lewiner, Vin’cius Mello, Adelailson Peixoto, SinŽsio Pesco, HŽlio Lopes
-
-
-http://www.matmidia.mat.puc-rio.br/tomlew/publication_page.php?pubkey=octree_cgf
-http://www.matmidia.mat.puc-rio.br/tomlew/publication_page.php?pubkey=fastdualoctree_sgp
-
-1. Disclaimer
-2. Available code compared to the papers
-3. Octrees implementations
-4. Morton codes
-5. Data
-6. Hash table
-7. Requirements
-
-
-Disclaimer
---------------
-  This code is implements fast searches and the dual generation of static
-or dynamic pointer-based or pointerless octrees. It is provided "as is"
-and can be used freely. We just ask the users who would use this code to
-mention in their academic paper, patent or software documentation the
-original articles:
-
-@article{octree_cgf,
-    author = {Rener Castro and Thomas Lewiner and HŽlio Lopes and Geovan Tavares and Alex Bordignon},
-    title = {Statistical optimization of octree searches},
-    year = {2008},
-    month = {march},
-    journal = {Computer Graphics Forum},
-    volume = {27},
-    number = {6},
-    pages = {1557--1566},
-    publisher = {Eurographics},
-    doi = {10.1111/j.1467-8659.2007.01104.x},
-    url = {\url{http://www.matmidia.mat.puc-rio.br/tomlew/pdfs/octree_cgf.pdf}}
-}
-
-@article{fastdualoctree_sgp,
-    author = {Thomas Lewiner and Vin’cius Mello and Adelailson Peixoto and SinŽsio Pesco and HŽlio Lopes},
-    title = {Fast Generation of Pointerless Octree Duals},
-    year = {2010},
-    month = {july},
-    journal = {Symposium on Geometry Processing 2010},
-    booktitle = {Computer Graphics Forum},
-    volume = {29},
-    number = {5},
-    pages = {1661--1669},
-    publisher = {Wiley},
-    address = {Lyon, France},
-    url = {\url{http://www.matmidia.mat.puc-rio.br/tomlew/pdfs/fastdualoctree_sgp.pdf}}
-}
-
-
-
-If you have any comment, correction, question, please feel free to
-contact me at : lewiner@gmail.com .
-Thank to David Coeurjolly for the code porting to UNIX.
-
-
-
-
-Available code compared to the paper
-----------------------------------------------
-  The code contains simple implementations used to generate the result of
-our papers. We stripped down the time measurements (which are platform
-specific) and the robust dual marching cubes
-(http://www.matmidia.mat.puc-rio.br/tomlew/publication_page.php?pubkey=adaptive_implicit_sibgrapi)
-code.
-
-
-
-Octrees implementations
-------------------------------
-  The code contains implementations of a pointer-based octree
-("ptr_octree.*" files), pointerless octrees with recursive dual
-generation ("hash_octree.*"), pointerless octrees with optimized dual
-generation for the static strategy representing all the nodes
-("opt_octree.*") or only the leaves ("leaf_octree.*"), and the dynamic
-strategy ("mem_octree.*"). The octree is chosen at compilation time
-through the OCTREE_SWITCH macro.
-
-
-Morton codes
------------------
-  The Morton code operations in dilated integers are all grouped in the
-"morton.*" files.
-
-
-Data
-------
-  The data (implicit function or isogrid) is accessed through the
-data_access class. The isogrid must be in "iso" format, i.e. a binary
-file with 32-bits integers nx, ny and nz for the size of the grid,
-32-bits floats xmin, xmax, yminÉ for the geometry of the cube, followed
-by nx.ny.nz 32-bits floats for the data.
-
-
-Hash table
--------------
-  Finally, we made a very simple naive and simple implementations for the
-hashtable, in open ("hash_ptr.h") or close ("has_noptr.h") modes. The
-parameters of the hash function are chosen at compilation time through
-macros defined in the "hash.h" file.
-
-
-Requirements
-------------
-
-  The graphical interfaces require the openGL libraries with the GLU, glut
-and glui extension, available at http://glui.sourceforge.net/ .
-
-  We use Juha Nieminen, Joel Yliluoma's function parser for the implicit
-function, and our Marching Cube's implementation
-(http://www.matmidia.mat.puc-rio.br/tomlew/publication_page.php?pubkey=marching_cubes_jgt).
-
-
-Thank you for your interest, and have fun!
-http://www.matmidia.mat.puc-rio.br/tomlew/